Gene PHATRDRAFT_49590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_49590 
Symbol 
ID7198247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011691 
Strand
Start bp134940 
End bp135828 
Gene Length889 bp 
Protein Length212 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184402 
Protein GI219128401 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.568719 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TGAGGATGGT ACATTTGACG AAGAGAAACG ACAAACGATT ATTCTGCAAG CTATTGGTGT 
GAATGTAGCC ATCCCTTTCC CCATCTACCA GTCCGTAATT TTGGAATTGG ATTGCTTGTC
CGAAGGGAGA ATCCTTCGCT TTAAAATGAA TACGGATCGT GAGACCTCAT CGTTCCAGCC
CGTCCCATTT TCAGTGGAAG CATCGTCACA GCAAAGTCGG ACGGCCGGTG AAGACGATCC
GAATTCACCA CGCGGTAGCA CCAGTCGAAG TGGAGGTTCC TGGACAATTC TCAGCAGTCG
GGCTTCCGCA GACATTCCCT TGTCGGTACC ACAACAATTC TTGCCACAGT TCCATTCACC
AGCTTCGTCG GCGTTGCCGA TTCCAGATTG CGATTTCGAC GACTGGACGG AACATTCCCA
ACCAGCAGTT GATGTCGCTC TCAGCAGCTG GCAGGAGGAA GCGCACTGGA TGTCATTTCG
GAACGCGGTT AATGTATTCG TACAAAAACG CGGGAGGCGA CGATCACCAA ACTCAATATC
TTACAGTCAG TATCTCGACA GCCAACCGAC GACACGAGAT GTATCCCAAC ATCAGCACGA
TACTGATTCG GATGTTTCCT CTCTGGGGCA ACAACTTCTA CAGTACGGTT TGAATCGAAC
GGAAATTTCG ACAAATGAAT CCCCGTCAAA TCAACCTGAG ACCCGCATAC AACAAGCGTT
GGCACAAGCT GAAGCTGACG AACTGGAATT CGCGGAATTG ATAAAACAGA ATGCACAGCA
CTGAAATGTG TACCAATCCT GACGCAATGT CCGGTTTCCG CAATCTGTAT TTCAGGGCAA
GGCGTAGGAC TGGAGGGTAT TCACGTCCTG ATTCCGTACC TAATGTCCT
 
Protein sequence
MNTDRETSSF QPVPFSVEAS SQQSRTAGED DPNSPRGSTS RSGGSWTILS SRASADIPLS 
VPQQFLPQFH SPASSALPIP DCDFDDWTEH SQPAVDVALS SWQEEAHWMS FRNAVNVFVQ
KRGRRRSPNS ISYSQYLDSQ PTTRDVSQHQ HDTDSDVSSL GQQLLQYGLN RTEISTNESP
SNQPETRIQQ ALAQAEADEL EFAELIKQNA QH