Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_49590 |
Symbol | |
ID | 7198247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011691 |
Strand | - |
Start bp | 134940 |
End bp | 135828 |
Gene Length | 889 bp |
Protein Length | 212 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184402 |
Protein GI | 219128401 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.568719 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TGAGGATGGT ACATTTGACG AAGAGAAACG ACAAACGATT ATTCTGCAAG CTATTGGTGT GAATGTAGCC ATCCCTTTCC CCATCTACCA GTCCGTAATT TTGGAATTGG ATTGCTTGTC CGAAGGGAGA ATCCTTCGCT TTAAAATGAA TACGGATCGT GAGACCTCAT CGTTCCAGCC CGTCCCATTT TCAGTGGAAG CATCGTCACA GCAAAGTCGG ACGGCCGGTG AAGACGATCC GAATTCACCA CGCGGTAGCA CCAGTCGAAG TGGAGGTTCC TGGACAATTC TCAGCAGTCG GGCTTCCGCA GACATTCCCT TGTCGGTACC ACAACAATTC TTGCCACAGT TCCATTCACC AGCTTCGTCG GCGTTGCCGA TTCCAGATTG CGATTTCGAC GACTGGACGG AACATTCCCA ACCAGCAGTT GATGTCGCTC TCAGCAGCTG GCAGGAGGAA GCGCACTGGA TGTCATTTCG GAACGCGGTT AATGTATTCG TACAAAAACG CGGGAGGCGA CGATCACCAA ACTCAATATC TTACAGTCAG TATCTCGACA GCCAACCGAC GACACGAGAT GTATCCCAAC ATCAGCACGA TACTGATTCG GATGTTTCCT CTCTGGGGCA ACAACTTCTA CAGTACGGTT TGAATCGAAC GGAAATTTCG ACAAATGAAT CCCCGTCAAA TCAACCTGAG ACCCGCATAC AACAAGCGTT GGCACAAGCT GAAGCTGACG AACTGGAATT CGCGGAATTG ATAAAACAGA ATGCACAGCA CTGAAATGTG TACCAATCCT GACGCAATGT CCGGTTTCCG CAATCTGTAT TTCAGGGCAA GGCGTAGGAC TGGAGGGTAT TCACGTCCTG ATTCCGTACC TAATGTCCT
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Protein sequence | MNTDRETSSF QPVPFSVEAS SQQSRTAGED DPNSPRGSTS RSGGSWTILS SRASADIPLS VPQQFLPQFH SPASSALPIP DCDFDDWTEH SQPAVDVALS SWQEEAHWMS FRNAVNVFVQ KRGRRRSPNS ISYSQYLDSQ PTTRDVSQHQ HDTDSDVSSL GQQLLQYGLN RTEISTNESP SNQPETRIQQ ALAQAEADEL EFAELIKQNA QH
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