Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_49589 |
Symbol | |
ID | 7198203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011691 |
Strand | + |
Start bp | 133558 |
End bp | 134719 |
Gene Length | 1162 bp |
Protein Length | 332 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184310 |
Protein GI | 219128208 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.966771 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGGTTG AGATTATACC GGATATCGTC GATGACGGGA GCGAGTCCTC ACAAAGCTAT AACGTCGACT TTTCTCGTCA ATACGCCTGC GAGCCTTCCA CGTCTGCCTT TCCGAGTGGG AAGTACGATC GGGAAGGTGA AGGCCCCTGC ACTGAATGCG GGATGCAGAC TCATGATATC CAACACGATT TCCTTAGCCA ACATCAAAAA GTTCGTTTGA ACGTTGACCA AGAATTACGC AGGGGGCAGT GCCTCCTTTG CTTCCCCATC GCCTCGGAAG CTAGTCTTAA CCGGGTTGAC CCAAGCCGAC AATCAAAAAC TTGCGCCGAT GACAGTACGG ACACACATTG GAGTAGATGC AGCAAACGCA TGAAGCAGAC ACACCACATC GTTGCACGTC GTGTCTCCCA ATCCAACATG TTCAAATTCA ATCATTCTCT TGATGTGAAT GCTGAAATTG AGGAAATAAA GATCGGAGGA AGCTACGACA TCGCGGACAT TCTTTGTGCA ATGAAAACCG CCCCTCACGA CCACCTCATT CAAGAGCTCG GCTGCGAAAG TCTATGGATA CTCTCCTGGG AGGATGAAAA TGCAAGTGCC ATTGGTTGCG TCGGAGGGAT TCCAATGGTG CTCAACGCCA TGATTCGCTT TCCTATGAAT TCGCACTTGC AACAGTGCGC CTGCGAAACT ATTCAGAACT TAGCTTTGGA CGAACAGAAT CGTCGAGAAA TTGTCGAGCT TGGCGGGATC TCTGTTATTG TTAAAGCTAT GATGCGTCAT ATGGAGTGCG CCGGTATTCA GCAGTGTGTA TGTACAGCTT TGGCCAGTAT CGCCACCGAT CCGGCCAATC GTCCACTAGT GGCTGACGCT GGAGGCTACG ATGCCATTGC AGTGGCAGTC CGCAACTTTG CGGACAACGA ACCCGTTGCA CGAGCAGCCT ATGACGCACT TGCCATACTC GGTTTTCCAC AATGCACTTC ATTAGGAACC TGGCGGTAAC AACACAAAAT GATTTCATAG CGAAATCGCT TCTCGCAACA AAAACGAATG CAGGTGGATT TCATCAGAAG GTTGGGCCGA TTGAGAGTGA GCCCCCGTTT CCCACAATTC GTAATGTAAG TGAATTACGG TGACGAAAGG AAAGTAAGAA AAAAAAGGGT TG
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Protein sequence | MPVEIIPDIV DDGSESSQSY NVDFSRQYAC EPSTSAFPSG KYDREGEGPC TECGMQTHDI QHDFLSQHQK VRLNVDQELR RGQCLLCFPI ASEASLNRVD PSRQSKTCAD DSTDTHWSRC SKRMKQTHHI VARRVSQSNM FKFNHSLDVN AEIEEIKIGG SYDIADILCA MKTAPHDHLI QELGCESLWI LSWEDENASA IGCVGGIPMV LNAMIRFPMN SHLQQCACET IQNLALDEQN RREIVELGGI SVIVKAMMRH MECAGIQQCV CTALASIATD PANRPLVADA GGYDAIAVAV RNFADNEPVA RAAYDALAIL GFPQCTSLGT WR
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