Gene PHATRDRAFT_49568 details

Gene Information

• Locus tag: PHATRDRAFT_49568
• ID: 7198234
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011691
• Strand: +
• Start bp: 70399
• End bp: 72469
• Gene Length: 2071 bp
• Protein Length: 605 aa
• GC content: 55%
• Product: predicted protein
• Protein accession: XP_002184298
• Protein GI: 219128183

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.110101
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTTATTGTTG GAGAGCATAA AGAGGGTGTC GGTAGAGGAA CGGAACGGTA CAGTACAGAA 
CGGCAAGGTG CAGTAGTGTA AGATGCAGCC GTTACAGGAA GACGGCGAAC GTCCAGCACC 
GGATCCACTC GCGGCTCCGG ACGATACCAA CAACAACAAC AACAACAAGG ACTACGACGA 
CTACTCTCCC GCTCACACAC ATCTCAAAAC GTACACGGCG GGAGAAGACA AATCGCGACT 
CCAACAAGCG GCTCGGGAAC TCGGACTTCG TCAAGCTCGT CAGCCGCGAC GGCAAGTCCG 
CAAGGTCCAC GACTTTCACC AGAACCCCGT ATCCATACAG GCTTTCTGGA ATGCTCTCTG 
GAACTCGGCG ACGGAAGACG CGCGCATGCG AGCCGTCTAT GTCCCACCGC ACTACGATGC 
CCAAGGAATG CTGCTCGGGG ATTACTACCA CGACAACATC GACGACGACG ATTACTTCTT 
CCGACACGCC CCGTCGCAGC CCGATACGGA ACTCGGACCC TCCCGACCTC CCTTGTCGTC 
TTCGTCCGCC GTAGATTCAC ACGGTGAACC ACTCGGCGGG GGAAATTTGA CCGCTGCCGT 
CCTCGGAATC GTCAAAGGCA TGGTCGGTCC GGCGATCTTG TATCTACCCC ACGGATTCGC 
CACCGCCGGA TACCTAGTAG CTCTCCCTAT CGTCATGGTT TGTACCCTGC TCTTTTTGTA 
CTCCTCCCGC TGTCTACTGG ATGCCTGGAA GATCGAACAG GAAAAAGTAT CGCCACCGCA 
ATCTCGAGAA AGTGACACAT CGTCCTCCAA CGAACGTACC GCACTACTCC CACATCACCG 
TCCACGGCAG TTCTTGTCCT ACCCGGAACT CGCCTACCGA GCTCTCGGAC CTTCCGGAGA 
ACGGACCGTC CAACTCGGAA TCGCACTCAT GCAATCCGGC GTCTGTTTGA CCTACCTCAT 
ATTCGTACCA CAAAATCTAC ACTCCTCCTG GTTGCACCTC ACCAATCAGT CCGTCGCGCC 
CTCCTACTGG TTGATTGTCA TGTTGGGTGT CCAGGTACCT CTTTCCTGGA TACGGGATAT 
TCGCAAATTT ACACCCACCA ATTTGCTCGC CAACGGACTC ATCCTTTACG GACTCGTCAC 
CTGCATTGGC TTTGCTCTGG ACGAAGCCTC ACAACCCTGG CAACCGGTTG CGGCTGTTGT 
GGACCCGGCA GCCGTCCACG ACAGTCCCTG GGCCAATATT GGACAACATT TCGCAGCCCT 
GCAACCGTGG GCTGCCGACT GGTTCCTCTT TGTCGGTACC AGTGTACGTG CATATTCACG 
TACTCATACA TGTCGACAAC CCGGAAATTA GTCGCTGCCT TTTGTCTGTT GGTTCGCGGT 
GTATATCCCA ACGTACCCAC ACGTTCTTTG TTTTTAATTT CCTTTCCTCC TATACAGGTC 
CTGCTTTTTG AAGGATCCAT TACGCTCCTG GTGCCGCTGC AGGAAGCCGT GGATGACGAA 
CAGCAACGTG CCCAATTCCC GGCCGTCTAC CAACGCGTGA TTCTCAGTAT TGTTGGCTTT 
TACGTCGTCT TTGGCCTGAC CTGCTGGATG GCCTTTGGTC CCGACGTGCA AACCGTCTTG 
ACAACCTCGC TGCCCAACAC CAACCTCGCC ACGACCGTGC AACTGGCGTA CTCAGTCGCC 
GTCTTGCTCA CATTTCCGTT ACAAAATTTC CCTGCTCTAG AAATTGCCTG TCGCGGAATC 
CAATCACAAG TCCGCAAACG TACGCATCTG GCAGTTTCCC GGAACGTGAC GAGTTCTGTC 
CTGGTCTGTT TGCTCGGTGC CGTGGCTGTC TGGACCATGG ATGATCTCGA CAAGGTCGTA 
TCGCTTATGG GATCACTTTT GGGTTGTCCG ATTGCCTTTT GTTTTCCACC GCTGATTCAT 
TCGCGCCTCG ATCCCAATCT ATCGATCCAG CGATTGTGGG CCAACCGGAT TGTGGCCGGC 
TTGGGTGTCG TCGCCATGGT ACTGGCGTCC GCCGTGACAC TCATTACGTG GTAGACAGAG 
CATTGTCGCG CGACGCAGGC CAGTGGATTT A 

 

Protein sequence

MQPLQEDGER PAPDPLAAPD DTNNNNNNKD YDDYSPAHTH LKTYTAGEDK SRLQQAAREL 
GLRQARQPRR QVRKVHDFHQ NPVSIQAFWN ALWNSATEDA RMRAVYVPPH YDAQGMLLGD 
YYHDNIDDDD YFFRHAPSQP DTELGPSRPP LSSSSAVDSH GEPLGGGNLT AAVLGIVKGM 
VGPAILYLPH GFATAGYLVA LPIVMVCTLL FLYSSRCLLD AWKIEQEKVS PPQSRESDTS 
SSNERTALLP HHRPRQFLSY PELAYRALGP SGERTVQLGI ALMQSGVCLT YLIFVPQNLH 
SSWLHLTNQS VAPSYWLIVM LGVQVPLSWI RDIRKFTPTN LLANGLILYG LVTCIGFALD 
EASQPWQPVA AVVDPAAVHD SPWANIGQHF AALQPWAADW FLFVGTSVLL FEGSITLLVP 
LQEAVDDEQQ RAQFPAVYQR VILSIVGFYV VFGLTCWMAF GPDVQTVLTT SLPNTNLATT 
VQLAYSVAVL LTFPLQNFPA LEIACRGIQS QVRKRTHLAV SRNVTSSVLV CLLGAVAVWT 
MDDLDKVVSL MGSLLGCPIA FCFPPLIHSR LDPNLSIQRL WANRIVAGLG VVAMVLASAV 
TLITW