Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_49567 |
Symbol | |
ID | 7198233 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011691 |
Strand | + |
Start bp | 67757 |
End bp | 69587 |
Gene Length | 1831 bp |
Protein Length | 345 aa |
Translation table | |
GC content | 55% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184297 |
Protein GI | 219128181 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.157197 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ACAAGGCCAG CTTCTCACCC TCACCCTCAC ACGAGAACGA CGACAACGTC GAGAACCAAT GTCATATTCA GGAACCATTC CGCCTGCAAA GCATGGAGAG GAGAGAAGAT TCTCCTTGGG GACCAATACC TCTGCGTTGG CGTTGCAGCG GTCTTCCTTT CCTGCTACCA AGCAGAAACT CAGTAGTGCT CTCTATGGTG CCAGTGGCCT TTTAGGTGAG CAGATCCTTT CGTCTCACGG TCCCTATGCC AGTAGCGGTA GCGAATTCCA CCAAGAAAGT ATGCGTCGGC AAAGCCAGTT TGAGACGGAA TCTAACGCCT TTACGAGCAA TCCCGAACAG CCAAAAAGCT CAAAGAAGGC AGACGGCGAG GGATCCCCTA CTCCACGTCA CCCCCCTCGC CGTGTGCCCG TTTTGCATGA CTATCATGAC AACTATCGCG ATCCACTGAA CTTTCAAACC GTAAAGAAGG GCCCGGATAC GGCCAACGTT GATGATTCTG CGGAGGGTCG GAAGGAGAGC AGGGCCGTTT TTCGTGGTGG CGTTTCGGTC CATTTTCCGG AGCGTCTCTT TGAAATGCTG GAGCAAGTGG ATTTGATTGG AATGGCTCAC GTTGTCTCGT GGCAGCCCCA CGGACGAGCC TTTCTCGTGC ATCGGCCGCA AGAGTTTGTT GCGGAAGTTA TGCCACGGTA CGTACAATCA TACTACGACT ACAGCGGATT TCAAAGATTA CTCACAGCAA ATTTGAACCC AGTTTCTTTC GTCAGAGCAA GTTTACATCG TTTCAACGTC AATTGAATCT CTACGGATTT GTTCGTTTAA GTACGGGTCG AGACTGCGGA AGCTACTATC ACGAATGCTT TCTCCAAGGC TGTCCTGCGC TATGCCGCCG GATTGTGCGC CGCCGCATCA AAGGGAACGG AGTCAAGCCG GTGCCTTCGC CTTCCACCGA GCCGGATTTC TACAACATGG AATGGTGCGA GGCGTCCGGT CCCAAAGCAA CGGAAGGGGA GCAGCCGAGA CCGACAGTCC ATGCCAAAAC GAATCGTGAA CATTCTCAAT TCGTTCCGTG TGCCGCCACG TCCACGTCCA CCGGTGGTTT CCACGGAATC CCCGATCACC ACGGCTACGC GTGGGCCGGT CAGCGTCACC ACGGAGCGCC GGGTGCCGAC GCGCGATTCT TGAATTCCGA AGCGGCTTAC ACGAATCCGA TGCTTGCGAA TCCCTGGGCT ACCTACTCGA TGACATCAGA AAGCCATCGT TCGTTTGCTC CGCAGTTTTT CGGAAATTCC GGGGAGCACA TGGGCCATAC GGGTATGCTT GGTTGGGATC CGTACGCGTC GGGCAGCAAC ACAGCTCCCT TTCGTTGGAA TTCGTCGTTC CAGCCTCCGA GCGCTGCGGG GCGGGGTCTC GTGCGCGACC ACCCTTTGGA GGGGCGGTTG GTGACGTTTG GTCGCGGGGA CTTGGACTAC TCGCGACGAT ATTCCGCCGG AGGTGGCGGT CTGGACGGCG GCGAAGTGCG ATCGAACGTG CGGATGAGCA AACTACCGGA AGATCCGTAC GCAGCGGAAG AAAACCCGTG GTCGTTGTTG TCCGACTTTG CGGCGTTGGA CGACGCGGCC AACCAAGATC CAGTCAAGGA CTTTTGGTAC GGGAACCGGT AGACTTTGTC GGTCACGAAA ATTACTAGGA AAAGGCTGGT GGAGCAATGG TAAAGAAAAA AGAAGCATTG GAATTTGAAT GTGTCGCTGC CGATGTGTAA AATCGTTGAC TGTGAATTAA GTTATTTAGG TACATGGTCG GCCCGAACCT AGTGCACCGA GCGCCAGTGT C
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Protein sequence | MLEQVDLIGM AHVVSWQPHG RAFLVHRPQE FVAEVMPRKF EPSFFRQSKF TSFQRQLNLY GFVRLSTGRD CGSYYHECFL QGCPALCRRI VRRRIKGNGV KPVPSPSTEP DFYNMEWCEA SGPKATEGEQ PRPTVHAKTN REHSQFVPCA ATSTSTGGFH GIPDHHGYAW AGQRHHGAPG ADARFLNSEA AYTNPMLANP WATYSMTSES HRSFAPQFFG NSGEHMGHTG MLGWDPYASG SNTAPFRWNS SFQPPSAAGR GLVRDHPLEG RLVTFGRGDL DYSRRYSAGG GGLDGGEVRS NVRMSKLPED PYAAEENPWS LLSDFAALDD AANQDPVKDF WYGNR
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