| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49558 |
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| Symbol | |
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| ID | 7198185 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011691 |
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| Strand | - |
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| Start bp | 35105 |
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| End bp | 39356 |
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| Gene Length | 4252 bp |
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| Protein Length | 1106 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002184384 |
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| Protein GI | 219128363 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.022156 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CAACGTGCGA TACGAAAACA AGAACTACTA AGGGATCTGT TTGTCTCAGG TACAATGGTA
AGCTTTCAGG ATTGCAGACA CTACGAAGCT GCATATCATG CTAGTAGCAG ATTGACCGAT
TTCGGGCTTG AGCGTAGAGA GACTGACCAT TCGAGCCGCA CAGCTTTTGG CTCACAAGGA
AACACGTATC CCCTGGAAAA CTTTTCAGAT CCATCCGCAC ATTTTGGCCA ATGGTCGGTA
CAGCACAGCA GTGCAGGGAA TCTCCACCAC GGCAGTTTGA GCGCCAATCC ATATGCGATA
ATGCCGCATG TTCCTTTCAA CGAGACTCAA CAAATTAACC CCAATATTTT GAATCCCGTC
CGCCTGCAAC AAAATCATAG CCAGTTTGCG TCAGCTGACA CTGCTGAAAG AGAGGGATTT
TCAAACTCTA GCAATCAGCA AAAGGCTCCG TTGGGTCGTC ATAGAACACA GGTGGTGCAT
GACTATCACG ATCACTACCG CGACCCAGGA AACTTCGAAA GACCAGCAGC AGCGGGCAAG
TACCCTTCCA AAGAGGTTGG AAGCGGCAGG CCCTCCTTTC GTGGTGGCAC TTCAATTCAC
TTCCCGGAGC GGCTGTTTGA AATGCTGGAC CGAGAAGATG AGCTAGAGTT GGCTCATATA
GTCTCATGGC AGCCACACGG ACGTTCCTTT TTGGTCCACC GAACGGCCGA TTTCGTAGCC
ACTGTATTGC CGAGGTGCGT CTGTGGAGCA ATCCTTGATC CGTAGATTCT CCTTTGACTA
TATGCTTATC AAAAGCTGGT CTCGTTTTGT CTGTCCTACT ATAGGTTTTT CCGTCAGAGC
AAGTTTACCT CGTTTCAACG TCAGTTGAAC CTGTATGGCT TCACCAGATT ATCCGTGGGT
AGAGACAACG GAAGCTACTA TCACGAGCTA TTCCTGCGAG GCTGTCCCAA GCTCTGTCGC
CGAATCATCC GGCGGCGCGT CAAAGGCAAT GGCGTGAAAC CAACTCCATC TCCAAGAACA
GAACCAGACT TCTACAACAT GGAATGGTGT GATCAAAATG GACCCAAGAA ACAAGCGGAT
TCTGACGAGG ACGAAACCTC GCTTCCAATT GCAGCTGCGC TGGCGCCGTT ACTAGATGAG
GGATACGAGA ATTTGCGTCA CCAAGCCCTT CGACAGCAGC AAAATGACCA GTCGCAGCAG
CAGGCGTCTT TCTCTCGCCA GCAAGAAGCG GATAGTTTCT TGTACAATAG AAGAGGCCAA
AGCGGATTGC GGTTATCGTC CGGAAGAAAG CCTAACTTTC ACCACCAATT TGTGAGCGAA
TCTTCCTTTC AGCCAGTGTG TCGTTCGCTC TCTCGCGATC AAAAGAACGA GCATCCACTA
ACTAGAGATT GCTTCGTTCC CCATGCCGTC CTGGCTAGCA GAATCTCATT TCGGCCGCCA
AAGAGGGCAA AAGTAAGAGG TGTGGGCAAT CCCGAAGTAT TCGGTAGCAT CACGGATTTG
TTTTCCAGTG ACGACGACGA ATGCAATGTC AGGGATTCGA ATCTCCACCC CGATAAGCGA
TTTTAAGGCA AACTATAGTG AGGGATCGGC CTGTCTATAA CTTGCTACGG AAACGCTTGA
GGCAGCAGAC GATCCAACTG ACTGGAAATG TAACTTGCAA ATATTTTCAA AGCTGCCCTT
TTGCAACCCT ACTAGTGCTC CATGGTTTTT GCATAGCCAG AAGCAAGACC ACCGTTTTAA
CAGTCTTACA TAAATTAGGA GGGAAGCCAC AGATGTACGA AAGGCATCAC AGTCGAAACG
GCTATTTGTG ACAATAGGTT GCTCGTCGCT GACCGTGAGT TGACAGCGCA GAATGATTCG
GGGCATTTTC CTGTAAGGCC TGTCCTCCCT ACGAGTGTGG TCATCGGGGT CACAAAGGAT
TGCTATGACC GTAGGCGTTC ACATGCAAAC CACATTTTTC TTCAAGCACA GGAAAAACCT
ACTTCACAAA ATAGGAGAAA GGTATCATGG GGGCCACTGC ATCTCGAAGC GAGCATGTAC
ACAAGGCAGC GCGTAAAGTA TCACAGGAGC CCGAAAACGA TCCCGTTAGT CAACTGGTAT
GTACTGTACT GAAAGACGTC CCTTTCTCGT TTATGAGTGC AGACAAACCT CATCTCCATT
GCTCCTTTAG CCCTTAGATC CGTCAAAGGA CTTTTTCGAC CATGTGCACT CGTATTTAGA
GCTACGCCAG CGCTTGGATG AGACAGCAAA AGCAATCGAC CCCGATGGTG CGTTGAAAGC
ACTGACAGTC GATGCCCTCT TGGGCCGACG AGACCATGTC GATGGCACTT TTCCAGTAGA
ATTTCAGCAG CAAAGCGCTT ATGGAGAGAC CGTTGCCGAC ACCGAAGAAC TTTTGGTAGC
AGCTTCGTTG GTCCAAGCCG AGTTTCGAGA CTTCTTAAAG CGTATACAGA AGGATATGCC
TTGGCTTGCC GAAGAGGATC TCAGGGGTAA ACAGAGCAAT TCTTGCAACT TTGACAAGAA
TACCGACCCC TCAACTCGTA TTTGGTTGGC ACCGATGAAA GATGCCCAAC GTATTGTCGA
CAAGGCTTCC CTTAAGTACG CGGACCGATA TCCTGGGCCA CCGGAATCCT GGGTCTACGA
CGTCATCCGT GCCAGCGTTG TTTGTATGAA TGCGACAGAA ATCAAGGATG TGGTCGCCTG
GCTCTCCTCC AATTCGCATT CCACACCCTT GGTGGCGGCG AAGAATCGCT TTCAATCGCC
AACGAGCATT ACTAAATACC GAGATTTTGT CTTCTTGATC AAATTGCCTG TCGCGAATGC
TTCGTTTCAT CATGTGTGCG AGCTGCAAGT ACATCACGCT GCCATGGTCC AGTATCAATC
CCAGTCGCAG CACTACTATA AGAATTTGCG ATCCTACTTT TCCCACGTGA TTGATGTGGA
CGATTGGGAG CAGCGTATGG CAGATTTAGA AGCAATAGGA AGATATTCCA AGTACGATAC
CATGGACGAT GGGCTTTGTA CCAAGGTATC GGCGTGCGGA AACGTTTTCC GTATTGAGCG
TTTGGCTGAT CTGTTGGAAA CCAGTCTTCC TCCCTGCACG GACGCGGCGG TTCGCTTGTA
CCAAAAAGCA TTGGTACTTG TCATAAGCGA CTCTAACATG AAGAGCCTAG CTGTGGCGAC
CGTATACGAA AAACTGGGAG GTGCTCTATC CAGACGTGGA AAATACGGAG CCGCCCTGTG
TCTGCTGGAG GCTGCTTTCG AACTCCGCCA AACCGATTTG GGCGAGACAC ATCCGGATAC
TCTGAAATTG CAGAACGAGG TGGGCGTGTG TCATCATAGA AATGGCAAAT ATCAAATGGC
ACTGGCGACT TTCAAGACTG CTTTAGAGAC TCTCGAGCTT CAAGCTGGAA AGCGGCATAC
TCACACTGCC CAAGCACACA ACGACATTGG ATGTTTACTT CGCGATATGG GCAAGTACAC
AGAAGCTCTG GATCACCACC AGCAGGCACT TCAAATTCGC GAAGCTGTTC TGGGAAAGAA
GCATACGGCC ACGGCCTCTT CTTACGATAA CATCGGCGTT GTGATGCAAG AGAACGGCGA
CTTTGAATGG GCGCTGCAAT ATCATAGGCG GGCTTTTATT GTTCGCCGTG CTTTGCTCGG
AGATCATCCC TATACAGCCG TGTCCTACGA AAACATAGGT TTACTATTGA ATCGTCAAGG
CAAGTCGCTA AGGGCATTGA CTTTACTTGG AAGAGCTCTA GAGATCCGCG AAGCCTTCCT
TGGCGACCGC CACCCGGACA CGGCACGATC TCTGAATAGC GTCGGTCTCG TTTTGGCCAA
GCTTGGTCGT ACTCCCGAAG CACTAAGCTT TTACCAGAAA GCACTCACCA TCCGAGAGGA
TCTGTTGGGT AATGATCATC CGGAAACTGG AGTATCCTAT AGTAGTGTGG GAACAGCGTT
GCGTCAGCTT GGCAACTATA ATGAAGCGCT CGAATATCAC GAAAAGGCTT TGGTCGTGGC
GTCGGCAGCT AACGGCACGC ATCTCCAAAC AGCGGTTTTC CATTGCAATC TCGGTACGGC
CGAAGCCCAC CTCGGAAACT ACGACACCGC CTTGAAGCAG TACCATCAGG CTAAAGCGAT
ACGCACGCAA GTTCTCGGCC AGAGTCACCC CGATACACTG GCCGCACAAA GGTCTGTAGA
CGCAATCCTG CGTGCCAAAG TTCAAGCTTG GGGACGGTAC AACATACAGT AA
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| Protein sequence | MPHVPFNETQ QINPNILNPV RLQQNHSQFA SADTAEREGF SNSSNQQKAP LGRHRTQVVH
DYHDHYRDPG NFERPAAAGK YPSKEVGSGR PSFRGGTSIH FPERLFEMLD REDELELAHI
VSWQPHGRSF LVHRTADFVA TVLPRFFRQS KFTSFQRQLN LYGFTRLSVG RDNGSYYHEL
FLRGCPKLCR RIIRRRVKGN GVKPTPSPRT EPDFYNMEWC DQNGPKKQAD SDEDETSLPI
AAALAPLLDE GYENLRHQAL RQQQNDQSQQ QASFSRQQEA DSFLYNRRGQ SGLRLSSGRK
PNFHHQFVSE SSFQPVCRSL SRDQKNEHPL TRDCFVPHAV LASRISFRPP KRAKVRGVGN
PEVFGSITDL FSSDDDECNE KGIMGATASR SEHVHKAARK VSQEPENDPV SQLPLDPSKD
FFDHVHSYLE LRQRLDETAK AIDPDGALKA LTVDALLGRR DHVDGTFPVE FQQQSAYGET
VADTEELLVA ASLVQAEFRD FLKRIQKDMP WLAEEDLRGK QSNSCNFDKN TDPSTRIWLA
PMKDAQRIVD KASLKYADRY PGPPESWVYD VIRASVVCMN ATEIKDVVAW LSSNSHSTPL
VAAKNRFQSP TSITKYRDFV FLIKLPVANA SFHHVCELQV HHAAMVQYQS QSQHYYKNLR
SYFSHVIDVD DWEQRMADLE AIGRYSKYDT MDDGLCTKVS ACGNVFRIER LADLLETSLP
PCTDAAVRLY QKALVLVISD SNMKSLAVAT VYEKLGGALS RRGKYGAALC LLEAAFELRQ
TDLGETHPDT LKLQNEVGVC HHRNGKYQMA LATFKTALET LELQAGKRHT HTAQAHNDIG
CLLRDMGKYT EALDHHQQAL QIREAVLGKK HTATASSYDN IGVVMQENGD FEWALQYHRR
AFIVRRALLG DHPYTAVSYE NIGLLLNRQG KSLRALTLLG RALEIREAFL GDRHPDTARS
LNSVGLVLAK LGRTPEALSF YQKALTIRED LLGNDHPETG VSYSSVGTAL RQLGNYNEAL
EYHEKALVVA SAANGTHLQT AVFHCNLGTA EAHLGNYDTA LKQYHQAKAI RTQVLGQSHP
DTLAAQRSVD AILRAKVQAW GRYNIQ
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