Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_49552 |
Symbol | |
ID | 7198223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011691 |
Strand | + |
Start bp | 21334 |
End bp | 22255 |
Gene Length | 922 bp |
Protein Length | 241 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184287 |
Protein GI | 219128160 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGGCAG ATTCTCCCTT CTTGCTGCCT TTGAAAACCA TCGAAATTGT GGAACAGCTG AGGTTGATTC CGCACCCCGA AGGCGGCTTC TTTCTGGAAA CGCACCGCAG TGGGAGCGTA CCCATGACCT CACGGGGTGG CACCGACCTC CAGAGTCCCT CCGCCGAGCA GCTCGTCACC ACAGTCGGTC GTGAGTCGAA TCGCCAGGAC CAAGACCCCC GTCGTAACGC CCTGACGAGT ATCTATTGGT TACCCACCAA GGCCTCGCCT CTGCTACTCT TGTGCGTCAA TCGATCCGAT CACGTGCATT ATTATCACGG GGGCAAGCCC TTTGAATACT TACTCTTTCT GCCAAATCAC GACACTTCCG TGCGCCGTGT TATTTTGGGT CCGGATTTAT CAGCCGGTCA TCAACTCCAA GTCTGTGTTC AGGGTGGGAC CTACAAGTGT GGGCGTTTGC TGCGTGATGC CTATCCACAA CAGCTACCGT ACGACTACAG TCTTGTGGGA GAGGCTGTGG GACCAGGATT TGATGTGGCT GATTTCAGAC CACTGCAAAT CAGCGATTTG GAAGCGTGTG GAAATGACGG TGTCAAAACC ACCCTGGCAC CATATCTTTA TAGCCATCAT CAACCCCCAG ATCCCAACCT TCACACCGCA TTGGATTTTG ACGGTTTTTA CAATCAGGAC GAGACGCAAA AGGCTCGTTC TCAAGACCGC ATTTAGAATA TCTGTACCAT CCCATCCCGC CTTGCCGTAA GCTGTTGGAG TCGATCGCAT CTTCTCCGGT ACGCGTGCAA GTTCGTTTCC CATTCGCACC GCTTCTCTCC CTCGTTCTGT ATCGCATAGA CGAGATGACG GCGAGCGCAC AAGAGTCTCA CATAGATAAT GCGTTTCGAA GAGATTTTGC AATTGCTGTT CT
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Protein sequence | MSADSPFLLP LKTIEIVEQL RLIPHPEGGF FLETHRSGSV PMTSRGGTDL QSPSAEQLVT TVGRESNRQD QDPRRNALTS IYWLPTKASP LLLLCVNRSD HVHYYHGGKP FEYLLFLPNH DTSVRRVILG PDLSAGHQLQ VCVQGGTYKC GRLLRDAYPQ QLPYDYSLVG EAVGPGFDVA DFRPLQISDL EACGNDGVKT TLAPYLYSHH QPPDPNLHTA LDFDGFYNQD ETQKARSQDR I
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