| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_40472 |
|---|
| Symbol | |
|---|
| ID | 7198330 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011691 |
|---|
| Strand | + |
|---|
| Start bp | 507181 |
|---|
| End bp | 507671 |
|---|
| Gene Length | 491 bp |
|---|
| Protein Length | 140 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002184378 |
|---|
| Protein GI | 219128350 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.036166 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGGACT CGGATGAAGA TTTCTCCTTG GGAGAGGAAG ACAAATACAC AGAATATGAC
GGATGCACTG AAAAGCATGC ACTGGAAGAC ATTGGGCCAG AACACAAGGC AAAATCGGTC
CGGTTGAAGT CTCCAAAGTC GTCCAATCAG ACAAGGGGCC GGATGCCAAG CACACTTGAG
GTACTTTTGC CTATGGAAAG AGAAGCTTCC AGTCAGGGCA TGAATCCATT CATTGTATGA
TTGTCAAGTG CACCAATTTA GCGCGACAGT TCAAGGAAGA CATTCCAATG GAGGAGGCAG
CTGATGAGGC ATTGGAAATG GAGGAAGCTG ATGATTATGA TGCTTACAAA GCGGGATTAG
ACGAAGGTAT ACCTCCCGAA AATTATCCGG ATGAAAGCGG AGAGGAAAGC GATGTAGAGG
ATGTGTTTGG TGCGGCTAGC AATGCTGATC TCAAGGAGAA CGGAGACATT AAAGACACAG
TGCAAGTTTA A
|
|---|
| Protein sequence | MVDSDEDFSL GEEDKYTEYD GCTEKHALED IGPEHKAKSV RLKSPKSSNQ TRGRMPSTLE
CTNLARQFKE DIPMEEAADE ALEMEEADDY DAYKAGLDEG IPPENYPDES GEESDVEDVF
GAASNADLKE NGDIKDTVQV
|
|---|
| |