Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_40470 |
Symbol | |
ID | 7198179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011691 |
Strand | - |
Start bp | 495235 |
End bp | 496005 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | |
GC content | 56% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184470 |
Protein GI | 219128542 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAGTC CTTATGGTAG CACATGGACG ACACGAGCGA GTGCTGCAGA TAACGACTGG AATGGTCTGA CGTACGGTGA TGGGATATTC GTCGCTGTTG CCAGCACGGG CCTTGGCAAC CGGGTCATGA CCAGTCCAGA CGGCATCGCG TGGGCTAGTC GACCGAGTGC TGCGGACAAT AATTGGACTG CAGTGGCGTA CGGTAATGGA ATGTTCGTCG CGGTTGCCGC ATCTGGTATT GGCGACCGTA TCATGACGAG TCCTGACGGC ATAACTTGGA CACTCAGAGG GAACGCCGTA GACAATGAGT GGCGAAGCGT AACGTATGGT GATGGGACGT TCGTCGCTGT AGCGAGTACC GGCATCGGGA ACCGGGTTAT GACGAGTCCC GACGGCATCC AGTGGACGAT TCAAACCAGC GCTGCCGACA ATTGGTGGTC TGCCGTCACG TATGGCGACG GGACGTTTGT TGCTGTTGCG GCAACCGGCA CTGGCGATCG GCTCATGACA AGTCCCGACG GGATCACATG GACGACTCAA ACAAGTGCCC CAGACATGGA TTGGCGCAGC GTGACGTATG GGGATGGGAT GTTCGTTGCC GTTGCGAGTA CCGGTATCGG CAACCGGGTC ATGACAAGTC CAGACAGCGT GACGTGGACA AGTCAAGCCA GTGCCAACGA CAATGACTGG CACTCCGTGA CTTATGGCAA TACGACATTC GTTGCCGTGT CAAAAACTGG AATCGGAAAC CGGGTCATGA CCAGTGGTTA A
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Protein sequence | MTSPYGSTWT TRASAADNDW NGLTYGDGIF VAVASTGLGN RVMTSPDGIA WASRPSAADN NWTAVAYGNG MFVAVAASGI GDRIMTSPDG ITWTLRGNAV DNEWRSVTYG DGTFVAVAST GIGNRVMTSP DGIQWTIQTS AADNWWSAVT YGDGTFVAVA ATGTGDRLMT SPDGITWTTQ TSAPDMDWRS VTYGDGMFVA VASTGIGNRV MTSPDSVTWT SQASANDNDW HSVTYGNTTF VAVSKTGIGN RVMTSG
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