| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_40461 |
|---|
| Symbol | |
|---|
| ID | 7198173 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011691 |
|---|
| Strand | - |
|---|
| Start bp | 462781 |
|---|
| End bp | 463821 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002184466 |
|---|
| Protein GI | 219128534 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCTTC CTGAGTATTC CACGTTTACT GTAGCTCTAC CAGCGAGCAC TGCCAATGCT
GTCACCGAAC TGCCTACTAC GGACGCGAGT GCAACCGCGA GAACTGTTGC CCAAACTGGC
TTGCCGGCGT GGAAGGCAGC TCTTACCAAA TACACCATGA TGATGTTCAT TCTCGGCATG
TGCGTGTCAC TGCCACTCAC TTTGTGGCCC CAAAAATTAT TGTACAAGCT GAAACTCATC
AATCGCGTCC GTAAAGAACG CTGGGCGTTG GCCACGGGAC AAGGGTGTGC ACGCTGGATG
CTCCGTATCT TTCCCTTTTG CAGCCTCGAC GCGCAGGGTT ACCACGATCC AAATCCCCAA
CCGACTATTT GGGCTTGTAA CCACACCTCC ATGTTGGATG TGTTCCTCTT GCTCGCCGCC
GATCGGGCTC TCCGTGGGCC ACACAAACGT CCCATCAAAA TCGTCTACTG GAGAGGACTC
GAGACCAACC CCGTCACGCG TTTACTCTTC CGTCAGGCCG GCTTTATCGC CGTCAACATG
GCCGACAACG GTAACGGTAC CGCGAACGAA TATGATCGTG CCAGCTTTAA GACCTTTCTG
CGCGAGACCA AACAAGCGTT TGTGGATGGC TTCGATATTG GTATTTTACC CGAAGGACAA
TTGAATCCGA CGCCAGAAAA GGGACTACTG CCCGTCTTTT CCGGAGCCTA TACCATTGCC
AAATTATCCA AACGACCAAT GTCCCTCATG GCGTTACACG GTGCCCATCG CCTTTGGCAT
CCCGACGATG CCATTGGCAT GACCGTTACG GGTCGCAACG TATCGGTCAG ATCGTATCCC
GGCACTCGGG TCTACACCAG TGCCGACGAA TTCGTGCAAA CCTTTCAACA CGTAGTGGGA
CATTTTGGGA CATACGGAGT CGATTTGCCT CGCCCCAAAT TGCGATCGTG GTTGAATGGA
TCGGCCTACG CTCAGTTACA GCAGCAGTTG CAAGATGGCG ATCAGCAAAG CCCTCAATCG
CCCGCAGTCG ACACTCTGTA G
|
|---|
| Protein sequence | MPLPEYSTFT VALPASTANA VTELPTTDAS ATARTVAQTG LPAWKAALTK YTMMMFILGM
CVSLPLTLWP QKLLYKLKLI NRVRKERWAL ATGQGCARWM LRIFPFCSLD AQGYHDPNPQ
PTIWACNHTS MLDVFLLLAA DRALRGPHKR PIKIVYWRGL ETNPVTRLLF RQAGFIAVNM
ADNGNGTANE YDRASFKTFL RETKQAFVDG FDIGILPEGQ LNPTPEKGLL PVFSGAYTIA
KLSKRPMSLM ALHGAHRLWH PDDAIGMTVT GRNVSVRSYP GTRVYTSADE FVQTFQHVVG
HFGTYGVDLP RPKLRSWLNG SAYAQLQQQL QDGDQQSPQS PAVDTL
|
|---|
| |