Gene PHATRDRAFT_40430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_40430 
Symbol 
ID7198156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011691 
Strand
Start bp374905 
End bp376038 
Gene Length1134 bp 
Protein Length377 aa 
Translation table 
GC content58% 
IMG OID 
Productdihydrolipoamide succinyltransferase 
Protein accessionXP_002184355 
Protein GI219128302 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGACA GTATTTCCGA AGGCACGATT GTAGATTTGC CCGTGGCGCC GGGTGATTTC 
GTCAACGTGG ACGACGTTGT CGTCGTCTTG GAAACGGACA AGGTTTCCGT CGACGTGCGT
GCCCCGGAAG CCGGTGCCTT GGTCGAAATC CTCGGTGAAA TCGACGACGT TGTCGAAGTG
GGTACCAACC TCTTTCGGAT CGACACCGAT GCGGATGCAC CGGAAGCCCC CGTGGCGCCT
GAATCCACTC CGGAAGAAGT CGCGACGCAC ATTGCCGAAC CCGCACCGTC CCAAACTCCA
ACGTCCGCGC CCGTGGCGGC GGCGTCCGCC GCCACCAAGG CGCCACCACC ACCACCCGCC
GCCAAGTCTG CACCGCCGTC CGCTCCCTCC GGCGCCCCCG CGTCCCAACC CGTCTTTTTG
GGGACCCGCA ACGAACGTCG CACCAAAATG AGTCGCATGC GTCAGCGCGT CGCGGCGCGA
CTCAAGGATG CACAAAATAC CGCCGCCATG CTCACCACCT TTCAAGAAGT CGATATGGGT
AACCTCATGG AACTCCGTAA GCGGTACAAG GATGTCTTCC AAGAAAAGCA CGGCGTCAAG
TTGGGATTCA TGAGCGCTTT TGTCAAAGCC ACCACGGCGG CTTTGCAGGA AATTCCCGCC
GTCAACGGCT ATATCGACAA CGACACGCAA GAAATTGTTT ACCGCGAATT TGTGGACATT
TCCGTAGCCG TGGCCTCGCC CAACGGGTTG GTTGTGCCCG TCTTGCGCAA TACCGAGACC
ATGAGCTTTG CCGACGTGGA ACGCAACATT GCCGCCTACG GACAAAAAGC CAAGGAAGGG
TCCCTCAGTT TGGACGACAT GGCTGGTGGT ACTTTTACCA TTTCCAACGG CGGTGTCTTT
GGATCGCTGA TGGGAACCCC CATTATCAAT CCGCCACAAT CAGCCATTTT GGGAATGCAC
GCGACCAAGA TGCGGGCAGT CGTCAACGAA CAAGGCGAAG TGGTGGCGCG CCCCATGATG
TACCTCGCCT TGACGTACGA TCATCGATTG ATTGATGGCA GAGAAGGTGT CACCTTCTTG
AAGTCCATCG CCGAGAAGAT TGCGGATCCC TCCAAGCTGT TGCTGGAAAT CTAA
 
Protein sequence
MGDSISEGTI VDLPVAPGDF VNVDDVVVVL ETDKVSVDVR APEAGALVEI LGEIDDVVEV 
GTNLFRIDTD ADAPEAPVAP ESTPEEVATH IAEPAPSQTP TSAPVAAASA ATKAPPPPPA
AKSAPPSAPS GAPASQPVFL GTRNERRTKM SRMRQRVAAR LKDAQNTAAM LTTFQEVDMG
NLMELRKRYK DVFQEKHGVK LGFMSAFVKA TTAALQEIPA VNGYIDNDTQ EIVYREFVDI
SVAVASPNGL VVPVLRNTET MSFADVERNI AAYGQKAKEG SLSLDDMAGG TFTISNGGVF
GSLMGTPIIN PPQSAILGMH ATKMRAVVNE QGEVVARPMM YLALTYDHRL IDGREGVTFL
KSIAEKIADP SKLLLEI