| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_40329 |
|---|
| Symbol | |
|---|
| ID | 7198202 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011691 |
|---|
| Strand | + |
|---|
| Start bp | 128522 |
|---|
| End bp | 129412 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002184309 |
|---|
| Protein GI | 219128206 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.524213 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTTGT CACTGAGTGT TCTTTGGTTA GGTTCTTGCA GTGCTCGAAT GAATCACAGG
AGTCTACCAA AGGCCAGGAA CCGCGTATCG AAACCTCCGC TTGCTCGACG AATCTTCAAT
TTACCATCTC CATCACGTCG ATGCGATGGA TCTCACTGGC AGTATCACTG TAATGTTGAA
GAGCAGGGTT GGAGGGCCAA TCGGCGCATT CTTCCGCAAC AACAACAACA TCAGCAATGT
AGAACGCTGG CCTTTGCCGA GTCACCCTTG CTCTCCTCCG AGTCCACGCT CTGGGTCTTA
CGGGGGATAT CGGCAATGGC TTCCTACGTC GGGATTGTGG CGTACGTCGA TCGGCCGCGA
GGACGAGTGG GGGTCGGCAG TCGAGAAGTA GACGTCCGGC AATCTACCGT TCCCGGCGCT
GGTCTGGGCC TCTTCGCCGC CACCGACCTG GAACGAGGTA CCGTACTGGG CACGTACCCC
GGTGTCGTCC TACCTTTATC GCAAAATTTG CCGAAACTCC GGGACTTTCC AGCCTGCGAA
GGATACATTT GGAGATTTTC CGACAACAAA TTCGTGATCG ATCCCACCAA CGCCGTCGGC
ACTCTAGAAT CTGACTGTGT GGGCGGCAAT CCGAGCATGC CAGGATCGTT ATGGCTCTTT
ACCAATCTAC TGGAAATGTC CACCCCGACT ACCCTCTGTC GGATCAATGA ACCGCCAATA
GGACTGGACG TCAACGTAGT GACCAACGAA GATCTCCAAG GGCGGACGGT TACCTTTGCC
TTGGAACGTG ACGTCGCCAA AGGCGAAGAG CTCTTTATCG ACTACGGACT TTACTACGAT
CGCTCCTTGT ACGGAAAGGT ACCCGAAGCA GGTGAACATT TCAGGCAGTA G
|
|---|
| Protein sequence | MALSLSVLWL GSCSARMNHR SLPKARNRVS KPPLARRIFN LPSPSRRCDG SHWQYHCNVE
EQGWRANRRI LPQQQQHQQC RTLAFAESPL LSSESTLWVL RGISAMASYV GIVAYVDRPR
GRVGVGSREV DVRQSTVPGA GLGLFAATDL ERGTVLGTYP GVVLPLSQNL PKLRDFPACE
GYIWRFSDNK FVIDPTNAVG TLESDCVGGN PSMPGSLWLF TNLLEMSTPT TLCRINEPPI
GLDVNVVTNE DLQGRTVTFA LERDVAKGEE LFIDYGLYYD RSLYGKVPEA GEHFRQ
|
|---|
| |