Gene PHATRDRAFT_40300 details

Gene Information

• Locus tag: PHATRDRAFT_40300
• ID: 7198230
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011691
• Strand: +
• Start bp: 55851
• End bp: 58053
• Gene Length: 2203 bp
• Protein Length: 707 aa
• GC content: 52%
• Product: predicted protein
• Protein accession: XP_002184294
• Protein GI: 219128175

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGATAT CTCCGCAGGA AAGAGAGGCC CGAAGGGGAG TGCAAAGGGA GAATTCGCTT 
GGCCTCATCG ACATCTTCGG GGATCGGGCG GTCGTCGACC CCTACGCCAC GAGTAACCAG 
GAATTTTCCA AGTTGGCATC CAAAAACCCC ACCGAAAGGA GGTCAAACAA TTTACAGGGC 
TCTAAGTCGC TGCACGATTC TCGCACCAGC GCCAGTCTAG GTCCAAATCA TCGACGGCGA 
CAAATGCAGG TGGAATCGGA TGCAATTATG TCTGGGGCGG AAACGGAGGA CACTTGTCGT 
TCTTCGGCAA GCCGGATACG ACGAAGTGGA GAGAGGGTTC GGCGCAGTAA AGGGCGGGAA 
CGGAAAGCTG GAGTCAGCCG CACACGATCG TCCGGTACGC CGCGTTCTCT AGAGGCAGGT 
CTAAAGACTA CCCTTTCCCA CGAGAGCAAT CAGGATAGTG CACAAGCGGC TGACGATGAA 
ATGCTGCTGG AATTGGTTGA ACATCGCACT AAGGAACGCA GTCGTACTGG CTTGGTAAAG 
GTAACGCAAC GTACACTTTC CGTGCGAGGC GAAAGTAGGA GTGCACGAGG TTATAGATCG 
TCCGAACTAG CACCAGTGCC TCGTTCCAAA AGTTCCCGAG TCGAATCTAC CGACAAGTCC 
AGCGCCAAAG AATCGGTCCG GCTCCGAAAA ATTCCAGGTG AGCCTACTTC GACGTCGACT 
AGATATTCCT CAGGACGTAG AACACAGTCC GCCCGAGGTA CACGCAGTAG CAATTTATCG 
TGTGAGTTGA CGTCACACCT GCAGGGAAAA GCGAGAGTCT CAAAAAGGGG ACCTTCCTCA 
GTGACTGGAC ATCGCCGTCG TACCGACTCT AACGATTCAG CACGGTCGCA CGAGAAACCT 
CGTCGGTCAC GAACTCGAAG GGAACACACG CATGCTTATG CAGAAAAAAC GGGAGCTGGC 
AAAGGGGAAA GCGCTTCTCC TCGTCGTCGA CACCGCTCAC ACACTCATTC CCCTGTACGA 
CCTCCGAAGT CACCCCGTCG CCATCGACAG CTTTCTCCCC GAAAAGTCTT GGACTCGCCC 
AGTCTAGCCG GAGACGAAGA AAAATTTAGA CCTAGGCTCA CTTTGAAAGC CCCTTCATTG 
AAGGATTTAT CTTTGGATGA GCAATCCCCG AGATCACTTA CTGAAGCAGA AGGGGCATGG 
CTAGAGAATG CTAGCAAGGG AGACAACAGC ATGAAGCAGA AGAGTCAGGC TAGTTCCGAA 
TACGAATCCG AAGAAGAAAG TACCGCTGGA AGGAATAGCA ATGGCTCCGT GTTACAATTT 
GATCCTAGCC AATCGGATAA TGTATACCGT GTCAAGCAGG TCACAAGGAT GGATTCGGGG 
CTGCAAATCG GAGAGAACGG TCAGAGTGTA GACGTTTCGA TTGCGCAATT ATGCGATCCT 
TTGGGTGACG CCAAACCAGT TCTACGGGCT AGAAAAGAAT TGCCAATATT TGACTTTTTG 
GAAAGTAACG ATGATGCCAT GATGACATTT ACCGATACGG ACCCGATGGA AGTCAGCCAT 
AAAGCCGTTG GTCTTGACAG TCCTTCAGGC GGCGAGAATA GTGACAGTGA TGGTATTGAT 
GTGAATAAAT TTCAGATGCA TGTGATGAGT CCGGGCGTCT ATCATTCTAG CGACGAAGAT 
AGACGCGAGG CTCGGGCTCT TCGACCTCAC ACCAATCTTA CGTTTCGTAG CTCCGGAGGT 
GAAAGAGGAG CCGATGAAGC TATTTTGATG GCTAGTCCGA ACAAAGAATT ACCTATTTAC 
CCATCCGGAG GTGAAGAAGA GGAAGAGGAT GCAGTTCGGG AAGAAGATAA GATGGATTAT 
ATGGTGTCCA GGAAAAGAGA TCTGGGTCTG CCAAAAACAA TGGACTGCGA AAGCGAATCG 
TTCGACTTTG TGTCGTACGG AAGTGACTAC GCCAGCGAAA CGGACCGGTC ATCCCGCGGC 
ATCCGTAGCA AAAGTCGAGC TAAATCGCAG CCATCTGTGC TGGGATTGTC TTCTGGTGGC 
CAAGGGGACG AAGTCGGCAA AGTGCGGGTA AAAAAGCAGG GCCAAAAGGG GCGCTCAAGA 
CAGTCCGCGG TGAGAAAGAA ATCAAATGAC GGCTCTCCAG CGCGTCCATC CGACACTCAA 
GCGGACGTCG ACGACACTCG AAAACGCCGA CCTCGGAAGT TGA 

 

Protein sequence

MTISPQEREA RRGVQRENSL GLIDIFGDRA VVDPYATSNQ EFSKLASKNP TERRSNNLQG 
SKSLHDSRTS ASLGPNHRRR QMQVESDAIM SGAETEDTCR SSASRIRRSG ERVRRSKGRE 
RKAGVSRTRS SGTPRSLEAG LKTTLSHESN QDSAQAADDE MLLELVEHRT KERSRTGLVK 
VTQRTLSVRG ESRSARGYRS SELAPVPRSK SSRVESTDKS SAKESVRLRK IPDIPQDVEH 
SPPEVHAVAI YRGKARVSKR GPSSVTGHRR RTDSNDSARS HEKPRRSRTR REHTHAYAEK 
TGAGKGESAS PRRRHRSHTH SPVRPPKSPR RHRQLSPRKV LDSPSLAGDE EKFRPRLTLK 
APSLKDLSLD EQSPRSLTEA EGAWLENASK GDNSMKQKSQ ASSEYESEEE STAGRNSNGS 
VLQFDPSQSD NVYRVKQVTR MDSGLQIGEN GQSVDVSIAQ LCDPLGDAKP VLRARKELPI 
FDFLESNDDA MMTFTDTDPM EVSHKAVGLD SPSGGENSDS DGIDVNKFQM HVMSPGVYHS 
SDEDRREARA LRPHTNLTFR SSGGERGADE AILMASPNKE LPIYPSGGEE EEEDAVREED 
KMDYMVSRKR DLGLPKTMDC ESESFDFVSY GSDYASETDR SSRGIRSKSR AKSQPSVLGL 
SSGGQGDEVG KVRVKKQGQK GRSRQSARVH PTLKRTSTTL ENADLGS