Gene PHATRDRAFT_30486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_30486 
Symbol 
ID7198281 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011691 
Strand
Start bp220586 
End bp221320 
Gene Length735 bp 
Protein Length146 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184423 
Protein GI219128444 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTCGTTCAGT CGGTACAAAT AGACACCGCA ACCATGTGAG TGATTTGGAG AGGAGAAAAT 
GGAAGAGAAT GAGAATTGAA AACCTGCAGT ACTGAAGGAT GGAAGAGATG CGTTTAGGAA
ACGCGTTATA CATGTCTGGC ATATAGAGTA GTGCTTTGCT TGCAGGAGCT CGAGGAATCC
GGTGCTGCGG AGCGAGCGTT TTTATTACAC CAATCACTCG AAAACTGATG CTAAACTCAT
GAAGCGTTGT ATTCTTTCTG CAACAGGTCG TCCTCTTTGA TGCAAGGCCC TGAATTCCAG
CACATTTTGC GTATTCTTAA CACGAACGTG GAGGGAAAGC GCAATGTCGT GTTTGGTCTC
ACCAAAATCC CGGGGATTGG TCGCCGATTT TCAGATTTGA TTTGCAAAAA GGCCGAAGTC
GATGTTGATA AGCGTGCCGG TGAGCTTACC GCAGACGAAA TTGAAAAGGT CGTGGCCGTC
ATCCAGAACC CCCGTCAATT CAAAATCCCA CTTTGGTTTT TGAATCGTCA AAAGGATTTC
AAGACGGGAA AGTACAGTCA GGTCTTTGCG CAGAACATTG CCGCCAAGCT CCGTGATGAT
ATTGAGCGAC TCAAGAAGAT CCGAGCCCAT CGGGGTCTTC GTCACTGGTG GAATATTCGA
GTCCGTGGAC AGCACACTTG CTCCACTGGA CGCCGCCGAA CTTAAACTAT GACAATAAGA
CATACCAACT GGTTT
 
Protein sequence
MSSSLMQGPE FQHILRILNT NVEGKRNVVF GLTKIPGIGR RFSDLICKKA EVDVDKRAGE 
LTADEIEKVV AVIQNPRQFK IPLWFLNRQK DFKTGKYSQV FAQNIAAKLR DDIERLKKIR
AHRGLRHWWN IRVRGQHTCS TGRRRT