Gene PHATRDRAFT_16120 details

Gene Information

• Locus tag: PHATRDRAFT_16120
• ID: 7198227
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011691
• Strand: -
• Start bp: 43061
• End bp: 43789
• Gene Length: 729 bp
• Protein Length: 217 aa
• GC content: 56%
• Product: predicted protein
• Protein accession: XP_002184385
• Protein GI: 219128365

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.000135609
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GCCAACTACA TTCTCGTCTT GGACGCCATC AACTTTTGCT TTTGGCCCCA ACTCGGCTAC 
GAATACGTCG ATCTCGCACA AACCCTCACA TCCATGGCCA GTGCGGATCA TCGTCCTCTA 
GATCATACTC GAGAGCACGT AGACGCCGTA CTGCCCGACC ACGATCGAAA TTTCCTTCTC 
TCCGCCGAGT CCTTGCAAAC CTACACACCG GACCAACTCA CCAAGCTCAT GGCGCTGCAC 
CACAAACAAG GTAAAGTGCC ACCCAACGTA GCCGAACGCT GTCAATTACT CAATCAAGTC 
GGGGCCGTTT TAGCTACCCA CTTCGAAGGG TCTGCCTGGA ACGTCATCCA GGCTGCCAAT 
CATTCGGCCG TTCGCTTAGT GGGGCTCCTC GTGACGTATT TCGCCGGCTT TGGCGATTTT 
GGCGGTACCG CGGGTAGCCA CCATCACCAA GACCCGAATA ACCCGCCATC CGACGAAATG 
CGCCCCATCG CTTTCTTGAA ACGCGCCCAA ATCTGCGTTG GTGATTGGGA TGCCGCGTTG 
CAACTAAATT TGCCCGACCT GGATCAACTC ACAACCTTTG CCGATTACCG TGTGCCGCAA 
GTATTGCGGA ATGCCGGTTG GATCCGTTAC CGTCCTTCTT TGGCCGTTAT GGTGGATCAG 
GGCGTGGAGA TTGCTAGGGA CTCTCCGGAG GAATGGTCCA TTCGAGCGGC GACGGTTGTG 
GCTGTGGAG 

 

Protein sequence

ANYILVLDAI NFCFWPQLGY EYVDLAQTLT SMASADHRPL DHTREHVDAL MALHHKQGKV 
PPNVAERCQL LNQVGAVLAT HFEGSAWNVI QAANHSAVRL VGLLVTYFAG FGDFGGTAGS 
HHHQDPNNPP SDEMRPIAFL KRAQICVGDW DAALQLNLPD LDQLTTFADY RVPQVLRNAG 
WIRYRPSLAV MVDQGVEIAR DSPEEWSIRA ATVVAVE