Gene PHATRDRAFT_16105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_16105 
Symbol 
ID7198323 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011691 
Strand
Start bp453798 
End bp455001 
Gene Length1204 bp 
Protein Length272 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184465 
Protein GI219128532 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0443803 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TCCGCTGGCG CCTTTGTACT ACTGGGATTT CCCATTTCCA TGGGAGGGAT CGTGTCGCAT 
TTGTCCAATT ATAACCAACC ACACGTGCAA GTCTACGTGG TACGCATTTT ATGGATGGTA
CCCATTTATT CCGTCGAAAG GTACGTCTGC CTCAAAGCCG ACACTCGATG TAGCAATACA
ATTCCGTCAC CCTTTCCGAT GGAAACGTGA ACTCGTCACT AGAGACTGAT CCCCAATGCT
ATTCTCTCCT TTGTCATTTG CTGATTCGCA CACAGTTGGC TCGCCATGCG CTTTCACAAA
CACGCTATTT ACATTGAAAC GCTCCGGGAC TTGTACGAAT CCTACGTCCT CTACAGCTTT
TTACAGTTCC TCATTCAAGT TCTGGGTGGC GAAGAAGCTC TCATCTTGTT GTTGAAGGAC
AAGTCTCCTA CCCGTGGGGT CCACATGTGG GGACTCCAGT ACTGCGGCCT CAAACCGTGG
CTTATGGGAC AACCCGTCCG ACGCTCCGTG ATTGCCGACA CCGCCACCAC TACCAGCCCG
CACGACAACG GTGCCGTACG ACGCAGCAGT CGTCCCGAAA AACGTGTCCA CTGGACGTCC
CCATTCTTCG TCAAGTGTAA ATTCGGGGTT CTCCAGTACG TGCTCCTGAA ATTCTTTTTC
AGTATCGCCG TCATGATTCT GGAAAGACAC GGACTCTACA AGGAAGGAAA CTTCACCTAC
AAGGGCGGAT ATCTCTATAT TTGTGTATTG ACCAACATAT CCCAGTGCTG GGCCTTGTAT
TGTCTCATAT TCTTTTACTA CGCCACGAAA AACGAACTCG CCGCAATTCG ACCCGTCGGA
AAATTTCTTT CCGTCAAGGC CCTCGTCTTT TTCACCTGGT AAGTCTCGCT GCTTGTGTTT
GTACGTTTCG ACCTGCCGAG CGAACAATCT CCGGTACCGT ACCGAGTCGA CTTCTCGGCT
TGATTCCCGA CTGGAGTACG AAAGGTCTTT CTCACGCTGC GAAACAACGC TTTCTATCGC
CAGGTGGCAG TCGGTAGTAA TTGCAATCTT GTACAAAATG AATATGATAC CGCACTACAG
CGTAGGGCAG GACACGAACT GGACCCCGGA AGATGTGGCC AAGGCGATTC AGGACTATTT
GATTTGTATG GAAATGTTCT TGGCCGCGGT AGTGCACACC TTTGTCTTTC CGCATTCGGA
GTAT
 
Protein sequence
SAGAFVLLGF PISMGGIVSH LSNYNQPHVQ VYVVRILWMV PIYSVESWLA MRFHKHAIYI 
ETLRDLYESY VLYSFLQFLI QVLGGEEALI LLLKDKSPTR GVHMWGLQYC GLKPWLMGQP
VRRSCKFGVL QYVLLKFFFS IAVMILERHG LYKEGNFTYK GGYLYICVLT NISQCWALYC
LIFFYYATKN ELAAIRPVGK FLSVKALVFF TWWQSVVIAI LYKMNMIPHY SVGQDTNWTP
EDVAKAIQDY LICMEMFLAA VVHTFVFPHS EY