Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_16069 |
Symbol | |
ID | 7198158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011691 |
Strand | + |
Start bp | 378767 |
End bp | 380365 |
Gene Length | 1599 bp |
Protein Length | 532 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184357 |
Protein GI | 219128306 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.258027 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CCCCTCGACG AATACAACCG CACTTTGCTG AATAACGTGC ACCCTCCGGG CTGGCGAGAC CCTGCAGTCG CATCCGACAA GGACTTGTAC TACGACATGG TTGTTATCGG TGGGGGCACG GCCGGTCTCA TCACCGCTGC TGGTAGTGCA GGGGTTGGTG CCAAGGTTGC TTTGATTGAG GCCCACATGC TGGGTGGCGA CTGTTTGAAT GTCGGATGCG TGCCTAGCAA GACGATTATT CATTCTGCCA ATCTCGCTCA CCAGGTCCAG AATCAAACAC ACTTGGCCGA AGCCGGAATT GCGGTAGAAG GCCACGTGAC GGTTGATTTT GAAAAAGTCA TGGAACGCGT CCGGAAAATT CGCAGTACAA TCAGTCACCA CGATTCAGCC GAACGCTACA GTAAGGAACT CGGAGTTGAA ATTTACATTG GGTGGGCCAT GTTTACGTCG GAACGCACGG TCGAGGTCAA CGGCAAAACG CTGCACTTTA AAAAAGCGGC CATTGCAACG GGCGGATATC CAGTCCTTTT GCCAATGCCG GGTCTTCAAG AAATCTATAA GAAAGCGCAA GATTCCGGCG CCGTCACCAA CGAATCGCGG CCACAAGTCA TGACTAACGA AACAGTATTC AATCTGACCA AACGTCCCGA AAATATGGTC GTTATTGGCG CCGGCGTGAT TGGATTGGAA CTGGCCCAAG CGTTGCAGCG CTTGGGAGTT GGGGTGACCG TGTTGGGCCG TTCTGGGAGA GTCCTTCCTA AAGAGGATGA AGACATGGGT CTAGTGGTCA AGAATCAAAT GATTCAAGAC GGAGTGGACT TTCGCTTGAC AGTGCAAGAC TACAAAAAAA TTGAGCTCAC CGGCAAAGTT CTCGAAAACG GGTATCCCGA GATGAAATTG ACGCTTCAAG AAAAGGGCAA TTACGAACCA ACCGTTTTGT ATTGCGACGC AGTTTTAATT GCTGCTGGGC GTGCTCCTAA TGTTTCTGGT ATGAATTTGG AAGCTGCCAA GGTTCAGTTT GACAAAAAAA TGGGGGTGCA CGTCAACGAC AACCTCCAAA CGTCGAATAA ACGAATCTAT GGTGTTGGTG ATGTCTGTTC CGACTTCAAA TTCACCCATG CAGCCGACTT TATGGCTAGG GCTGTGATTC GAAATGCGCT ATTCTTCGGA AAAGAAAAAA TGTCGGAACT ACTTATTTCA TATGCTACGT TTACAAGTCC CGAGATTGCC AGTGTTGGTC TCTACGAAGA CGACTTGAAG GCCAAGAACA TTGCCTTCCG AGTCTTTGAA AAGCATTTCA AGGACAACGA CCGTGCCATT GCTGATGACG CTACTGATGG ATGGGTACGA TTTCGGGTGA ACGCCAAAAC GGACAAAATT TTGGGAGCCA GTATTGTGGG AGTTGGCGCG GGAAATATGA TTTCGGAAGT TACGCTTGCC ATGCAGTCGG CAACTGGACT AGGATCACTG GCCAATGTAA TTCATCCGTA CCCAACTACC GCTGAAGTCC TTCGCCAGTC TGGCGATCTC TACAACAAGA CCAAATTGAC AATGACGGCG AAAAAGATTC TCCGTGGTGT CGTCAAGCTG CAACGTTAA
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Protein sequence | PLDEYNRTLL NNVHPPGWRD PAVASDKDLY YDMVVIGGGT AGLITAAGSA GVGAKVALIE AHMLGGDCLN VGCVPSKTII HSANLAHQVQ NQTHLAEAGI AVEGHVTVDF EKVMERVRKI RSTISHHDSA ERYSKELGVE IYIGWAMFTS ERTVEVNGKT LHFKKAAIAT GGYPVLLPMP GLQEIYKKAQ DSGAVTNESR PQVMTNETVF NLTKRPENMV VIGAGVIGLE LAQALQRLGV GVTVLGRSGR VLPKEDEDMG LVVKNQMIQD GVDFRLTVQD YKKIELTGKV LENGYPEMKL TLQEKGNYEP TVLYCDAVLI AAGRAPNVSG MNLEAAKVQF DKKMGVHVND NLQTSNKRIY GVGDVCSDFK FTHAADFMAR AVIRNALFFG KEKMSELLIS YATFTSPEIA SVGLYEDDLK AKNIAFRVFE KHFKDNDRAI ADDATDGWVR FRVNAKTDKI LGASIVGVGA GNMISEVTLA MQSATGLGSL ANVIHPYPTT AEVLRQSGDL YNKTKLTMTA KKILRGVVKL QR
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