Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_16067 |
Symbol | |
ID | 7198258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011691 |
Strand | - |
Start bp | 208800 |
End bp | 209591 |
Gene Length | 792 bp |
Protein Length | 264 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184420 |
Protein GI | 219128438 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0854835 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | AAATTCGCTA ACATGTACAC CCTCAAAACC AAACTCCGTA AGGGATCGTA CGCAACAGTG TGGGAATGCC AACATTTAGA AACCAAAGAA ACCTTTGCCG TCAAAGTGAT TCAACGCAAA GAACTCCAAC CAAAAGACGA CGAGGCCGTC CTAAACGAAG TAGCGATCAT GCAGTCGTTA ATGGGCAACA AGTATGTGGT GCAACTTTTG GATTTTTACG AAGAAGAGGA CTGTTTCTAT ATTGTTATGG AGTACATGAC GGGCGGGGAT GTCTTTGATC GTATCGTGGA AAAGACGCAG TACACCGAAA AGGATGCACG AGATCTAACC CTGATCCTCC TCAAGGCGGT CAGTTCTTTG CACCAAGCCG GTATCGCACA CCGCGATCTT AAGCCGCAAA ACTTGCTGCT CGAATCAAAA CTCAATAATG CCCGCATCAA ACTCGGTGAC TTTGGCTTTG CTCGTCGTGT ACATACGCCT GAAAGTTTGA CAACACGTGT GGGGACGCCC ACTTACGTGG CCCCAGAAAT TCTAAAGAAT ATACCGCACG ACCAACGCGT GGATATGTGG AGCGTCGGCG TAATTATCTA TGTATTATTG GTCGGCTATC CACCTTTTTT GGAAGACAGT CAATCCGACC TTTTCCTCAA AATTCGAACC TGCGATTGGA AATTTATGGA GAACGATTGG AAACACATCT CCAAAGATGC CAAGGCCTTG ATCAAAGGCC TACTCGTGTC GGATCCTAAG GAGCGCTGGT CCATGCGGGA GGCTCTGCGC TGTTCTTGGA TT
|
Protein sequence | KFANMYTLKT KLRKGSYATV WECQHLETKE TFAVKVIQRK ELQPKDDEAV LNEVAIMQSL MGNKYVVQLL DFYEEEDCFY IVMEYMTGGD VFDRIVEKTQ YTEKDARDLT LILLKAVSSL HQAGIAHRDL KPQNLLLESK LNNARIKLGD FGFARRVHTP ESLTTRVGTP TYVAPEILKN IPHDQRVDMW SVGVIIYVLL VGYPPFLEDS QSDLFLKIRT CDWKFMENDW KHISKDAKAL IKGLLVSDPK ERWSMREALR CSWI
|
| |