Gene PHATRDRAFT_16052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_16052 
Symbol 
ID7198205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011691 
Strand
Start bp141165 
End bp141977 
Gene Length813 bp 
Protein Length271 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184312 
Protein GI219128212 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.032394 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GCCCAGAACG TGACCAACGT GACAATTACC GGTGGTGGAG TTCTGTACGG GAATGCCGAG 
CACTATATAT CATACTATGA TCCACGCTAC AATCGATTCG AACCAATTGA TCCCGATCCT
CGACGACCGC GATTGTTGCT CATCAACGAA AGTTCGTACA TCAACGTACA CTATCTGTCG
TTGCAGAACT CTTCCGACTG GACTCTGCAC ATACGTAACA GTGAACACGT GACGGTGCAC
AAACTCCGTA TTTACGGAGA CCGTCGCTTT CCGAATAATG ACGGCATTGA TCCCGACAGT
TCCTCGCACG TGCATATTTC CCATTGTGTC ATTGACGTGG CCGACGACGG CGTGTGCCCC
AAGGCACGCG ATTCCACTCG CGTTCTGCAC AATTTGACCG TCACGAATGT TCTCATTCGA
TCCCGCAGTC ACGCCATCAA GTTTGGCTCA CACACGGACG CCAACATGAC CGACATTTTG
TTCGAAAACA TTACGATCCT TGACAGCAAC TCCGGATTGG CGATTCAACA GCGGGGTCCG
GGGAATATCG ACAACGTCAC CTTTCGTAAC ATTTTTACGG AAACCCGGTA CGACAATCCC
AGATGGTGGG GGAACGGCGA GTGGCTCACC ATGACGAGCG AGCCTCGGAA CGAAGGCGAC
ATAATCGGCA AAGTTACTAA CTTGCGGTTG GAAAACGTTC GTGCTGTGAG CGAAAATGGT
GGCTTACTGA GTGGCCGTGG CTCGGGTATG CAAAACGTTT CCATGACTAA CATACAAGTA
ACGATTCGAC CATGGAGCAA TTACAGCAAC GGC
 
Protein sequence
AQNVTNVTIT GGGVLYGNAE HYISYYDPRY NRFEPIDPDP RRPRLLLINE SSYINVHYLS 
LQNSSDWTLH IRNSEHVTVH KLRIYGDRRF PNNDGIDPDS SSHVHISHCV IDVADDGVCP
KARDSTRVLH NLTVTNVLIR SRSHAIKFGS HTDANMTDIL FENITILDSN SGLAIQQRGP
GNIDNVTFRN IFTETRYDNP RWWGNGEWLT MTSEPRNEGD IIGKVTNLRL ENVRAVSENG
GLLSGRGSGM QNVSMTNIQV TIRPWSNYSN G