Gene PHATRDRAFT_55037 details

Gene Information

• Locus tag: PHATRDRAFT_55037
• Symbol: SKP3
• ID: 7195765
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011690
• Strand: +
• Start bp: 47255
• End bp: 50689
• Gene Length: 3435 bp
• Protein Length: 1017 aa
• GC content: 46%
• Product: sensor kinase protein 3
• Protein accession: XP_002184053
• Protein GI: 219127668

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.988682
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TAGTGAATGT CCTTGATAGA TCTTGGTGTG TGGAGATAAT CTTGGCTGGT GAGCCCCAAG 
GGAATCCAGA AAGTTCGGCC AAATTTTTGC GTGCTCGGTA CGATTCGAGG AAAGAATTCT 
ACAAACCTGC TCTCGTCTTT CCATCACCGA GACTATCCTG TAGTCGCTGT ACATGGCTCC 
GAATCACGGC ATTCAACATT GCCTCGTCAT GACATCAGTG GATGAGCAGG CGCAGCATGG 
CTTGGCATTA GAAAGAATTG GGATCGAGTC CTCGGTGTTT GACTCTATTG CTTCACCAAT 
CTTTGCCGTC GATCGCCTTG GGAACGTCAC CGACTGGAAC GAAACACTAG CAGATTTGTC 
TGGTTTTGCA TCCCTCGATG TGGTACGACG ACCGGCAGAG TTGATGTTAG ACGGTTGCGT 
AGACACTTGG CGCGAGGCCT TACAGACAGT GCAAAGAGCG AAACGTAGTT TTCGATGCAT 
GTTGCGTCTG CATAGCAACC AATCAGTATC GACTTCAACA TGGTATGCTG CGAGGATCTC 
CCGTTACAAT TCTTACGAAG GGATATTAAT TGGGGCTGTA TGTATGCTAG ATGAAGAAAC 
TCAAACATTC GACATGGGTA AGCATATCCA TGTTCAAGAT CTGCGTCCAA ACGATACTAA 
AGGATACGAA CCAATACCAG ATTGCGATTC TCGGGAACTT CTTGGCGGCA CAAACATCCT 
GATCATCAAA ATGGATAAGC ATGGAAGGGT TGATCTTTGG AACAAGGTTT CTACAGAGAT 
AACTGGTGTC ACGGAACGCG ACGCCCGCGG CGAGAATATT TCTGTATTCC TAACCGAGTC 
GTCTCGAAAA GCGTTTAGTG ATGTTATGGA TAAGGCATTG TCAGGTGAAG CATGCGCGAA 
CTACCAACTA GAGTTTTTGA CAAAAGATGG TTGCATTCGA TACCTACTAG GAAGCGTCAC 
ACCGCGCACT GATCTTGACG GCAGCATTGC GGGCTGCTTG GTTATCGCAC AAGATGTAAC 
GGAGACGGCC ATACGCGAAA GGACGGTCAC AGCAACTGCT CTTGAACTGA GAATCCTAAT 
TGATACAGCG AACGTAGCAA TATTTGGAGT CGACTGTGAC GGTTACATCA ATGAATGGAA 
TGACACGATG GCTAACACAT GTGGTTTCAC TGGTGATGAG GCGTTCCATA AGTCATTTGT 
CCATACCTTC ATTGCCCAGG ATCTGAGACC TGCCTTTGAA GTTGTATTGG AGATTGCCTT 
ACAAGGGAAA TTTACCAAAA ATTACGAGGC GGAAATTTTA ACAAAGCTTG GCGAGATACG 
GTATCTATTA TTGAATACCA CTGCTCGGAG AAACTCTGAA AACGAAATTA TTGGAGTTGT 
ATTGATTGCT CAAGATGTGA CCGAGGAATA CAAACATGAC CGTGCAGTTG CTGCTATGGC 
CAGTGAGCTC CGGCAGCTAA TTGACACTGC CAACGCCCCG ATTTTCGGCA TTGATTGTGA 
AGGGTAGGTA GCTTTGGAGT TTACTGTCTC GGGGAGTTGT TCGCAGTCTC ACCTTGTAGG 
CATTGTACAA TAGGGACGTG AACGAATGGA ATGACAAAAC ATCAGAGATT ACTGGATACA 
CGAAAGAGGA GGCCTTTGAT TGCTGTCTAG TGGAAACCTT TATCGTTCCA TCAATGCAGG 
AGTCCGTGAG ACACGTCCTG GAGACAGCTC TAAAAGGAAG AGGAACATCT AACTATGACC 
TCGAGTTTCG TACGAAATCC AACGAGATTC GCCATCTTCT TGTAAACGCA ACCACTAGAC 
GTGATGCTGA GAACAATATT GTGGGAGTAG TTGGTGTTGC ACAAGATGTC ACTGAAGCTG 
TCCAACGCGA CCGGGCTGTA GCTGGTATGG CTTTGGAGCT TCGACAACTA ATCGACACGG 
CCAATGCCCC GATTTTCGGG ATTGACATAA ATGGGAATGT AAACGAGTGG AATCGGAGAA 
CTCAAGAGAT AACAGGTTAC TCGAAAGAAG AGACATTCGA TGAGCCCCTA GTAGAACGGT 
TTATCGCCAA GCACATCAGG AAGAAGGTTC AAGAAATTCT GGACTCGGCG TTGCAAGGAA 
TTGAGACTTC AAATTACGAA CTCGAATTTT TGTCGAAGTC CGGAGAGCCA GCTTTTATGC 
TTGTAAACGC AACTACTCGA CGAGATCCCG AGTTTAATGT TGTCGGTGTT GTTGGGGTAG 
CCCAGGATGT TACCGAAGAC AGGAAACACG CAGAGGAACT ACGAAAGATG CAGTATTTGC 
AAGCGCTGCA AGAAGCAAAA GTGGAAACCG AGCGTAACAT GACTGCCTAT TTTGCGCACG 
AGCTAAGAAA TCCACTTGGA GCGATTGACA GTGCGCTGAG TGTGATGCCT GAAAACATTC 
CTGATTCGGC AAAGTCACTA GTCTCAGGGA TGCAACTTTG CTGCAGTTTC ATGTCATCAA 
TTATGAACAA CCTGCTCGAC GTCCGCAAAA TGGAAGAGGG TAAAATGACT CTGAACAAGA 
CCCCCATCTC ATTGAAAGCT CTCTCTAGAA AAGTACACAA AATGCTTGGA CCCTCTGTTA 
AACCTGGAGT AACATTTACA GAAAGTTGTA CAACCAACGG AAAAGATTGG GTTTTAGGAG 
ATGAACATCG CTTACAACAG GTGATGACGA ACGTTATCAC GAATGCGATT AAATACACTG 
TCGGAGGATC AATTTCAATA TACATGGGGT GGGAAGGAGA CGATGTGAAG TTCGAGTGTG 
TGGATACAGG ACCCGGCATT CCGAAACGAG AACAAGAGAA GCTTTTTCAG CGATTCGTAA 
TGAGAGGAGG GGCACCAGGG ACTGGACTAG GACTTGCAAT TGCAAAGCAT CTCGTGGATC 
TTGCGGGCGG ATCCATCCGG TTTGATAGTG ATCCGTCAAT ACAGGCTGGT ACTGCATGCA 
TCGTTTTGCT TCCGCTTGCA CTATGTGATC CTCCAGAAGA AGGAAACAAT GTCATCAAAA 
TGAGTTTGCT AGATGAGCCC TTAAAATTTC TGGTCATCGA TGATGTGAGA ATGAATCGTA 
CAATGTTGAA ACGCCGCCTC CAAACAGGAA TTGCACCAAA TTGCGTCTTG ACAGAAGCGA 
GTACGGGGGA AGAAGCCTTA CAAATAGTTG GCAAGCAGAC GTTTGACGTG ATTATTGTGG 
ACCAGTACAT GGAAGAAGCC GGAGGTGTTA TGGTCGGAAC CGATGTTGTT TATGCGATGC 
GACGTATGAA AGTTGAAGCT TTAATCATCG GCTGCTCTGG GAATGATTTG TACGATGAAT 
TCCATGACGC CGGTGCAGAC TGGGTTTGGC AAAAGCCAAT TCCAACAAAC GCCACTATCA 
TAAATCGCTT GCGCGAGGCA TTGCTGACGA AAAAATTGCT AGCTTCTAAA AAATTTTAGG 
TTTTTAAAGC GATCC 

 

Protein sequence

MAPNHGIQHC LVMTSVDEQA QHGLALERIG IESSVFDSIA SPIFAVDRLG NVTDWNETLA 
DLSGFASLDV VRRPAELMLD GCVDTWREAL QTVQRAKRSF RCMLRLHSNQ SVSTSTWYAA 
RISRYNSYEG ILIGAVCMLD EETQTFDMGK HIHVQDLRPN DTKGYEPIPD CDSRELLGGT 
NILIIKMDKH GRVDLWNKVS TEITGVTERD ARGENISVFL TESSRKAFSD VMDKALSGEA 
CANYQLEFLT KDGCIRYLLG SVTPRTDLDG SIAGCLVIAQ DVTETAIRER TVTATALELR 
ILIDTANVAI FGVDCDGYIN EWNDTMANTC GFTGDEAFHK SFVHTFIAQD LRPAFEVVLE 
IALQGKFTKN YEAEILTKLG EIRYLLLNTT ARRNSENEII GVVLIAQDVT EEYKHDRAVA 
AMASELRQLI DTANAPIFGI DCEGDVNEWN DKTSEITGYT KEEAFDCCLV ETFIVPSMQE 
SVRHVLETAL KGRGTSNYDL EFRTKSNEIR HLLVNATTRR DAENNIVGVV GVAQDVTEAV 
QRDRAVAGMA LELRQLIDTA NAPIFGIDIN GNVNEWNRRT QEITGYSKEE TFDEPLVERF 
IAKHIRKKVQ EILDSALQGI ETSNYELEFL SKSGEPAFML VNATTRRDPE FNVVGVVGVA 
QDVTEDRKHA EELRKMQYLQ ALQEAKVETE RNMTAYFAHE LRNPLGAIDS ALSVMPENIP 
DSAKSLVSGM QLCCSFMSSI MNNLLDVRKM EEGKMTLNKT PISLKALSRK VHKMLGPSVK 
PGVTFTESCT TNGKDWVLGD EHRLQQVMTN VITNAIKYTV GGSISIYMGW EGDDVKFECV 
DTGPGIPKRE QEKLFQRFVM RGGAPGTGLG LAIAKHLVDL AGGSIRFDSD PSIQAGTACI 
VLLPLALCDP PEEGNNVIKM SLLDEPLKFL VIDDVRMNRT MLKRRLQTGI APNCVLTEAS 
TGEEALQIVG KQTFDVIIVD QYMEEAGGVM VGTDVVYAMR RMKTGFGKSQ FQQTPLS