| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_51214 |
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| Symbol | GltX |
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| ID | 7195755 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011690 |
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| Strand | - |
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| Start bp | 576726 |
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| End bp | 581795 |
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| Gene Length | 5070 bp |
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| Protein Length | 1591 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | ferredoxin-dependent glutamate synthase, fusion of large and small subunits |
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| Protein accession | XP_002184279 |
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| Protein GI | 219128141 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TGCTTTTTCA CTGAAAATTA ATAAGAATAT TACAGGCAGC ACCAGACTCA AAGTCAGCAC
AAACAATCTC GTTTTGGTAT TCGTAGGAAG AGCATGATTT CCTCGGCTTG TCTTGTCGTA
CGCAAGGGCT CGCGGCTGTC CACCTTCCAT CGTGTTTCGG CGGTGAGTCT GCGTCGCACG
CTGCAACGCT GTACAGTGCC TGGCATCACA GCACTCCAGA ACCCTCTCCT TCGTCAACGC
TTCTACTCGA CGGAACGCAT CGTTCAACTT CGTAGCGGAA GGCGAGAGGA TGACTTACCG
AAAACTTTGT ATGACGCCAA AAATGAGAAG GAGAATTGCG GAGTTGGTTT GATTGCTTCC
CTCAAGTCGG TTCCTTCGCG AGCTATTGTC GAAAGGGCGG ATGAGATGTT AGTCCGTATG
GCTCATCGCG GAGGCTGTGG GTGTGATCCT GCTTCGGGGG ACGGGTCTGG TGAGTTTGAC
AAGCTGATTT TTCCTGATGT TGCCATCCGT GTGCTCACTT TGCCCCTTTT ATCTATCCAG
GTATGCTTTT CGGGATGCCC GATTCGTTCA TGCGAGCCCG TGCTAAGGAG CTTTTCCAGG
CAGAGCTTCC TGCAGTAGGA GAGTACGCAG TGAGCAATAT CTTCTTCCCG CCAGGAAGCC
ACGTGAACGG AAAAATGGAT GAATGCAAAG CGATCCTCGA TCGACTTGTC AAAGAAAGTA
AGCATACTAC TTTAGGGTGG CGCCCAGTCC CTGTCAACAA CTCTCAGCTC GGGAAGGACC
CACTGGATTC GGAACCTATC ACCCAGCAAC TCATTGTTAT CAACGATCGA AAGATTCCCA
ACAAAGCATT TGAGCAAGAT CTTATGAAAA TTCGCAAAAT GGCAGAGGAC GAAGTTGCCG
TTATTCAAGG ACCTGAAAGT GGTTTTTATG TCAACTCCCT TACCAGTCAT CACATTACCT
ACAAGGGGCA ATTGACCCCA GAGCAGGTCT CGCAGTACTA TCTAGACCTG CAGGATCCGT
CGTTTATCTC TCATTTGGCG TTGGTGCATT CCAGATTCTC GACAAATACC TTTCCATCTT
GGGAACGCGC CCAGCCGATT CGTATGATGT GCCATAATGG GGAGATCAAC ACCCTTCGCG
GAAACAAGAA TTGGATGTAC AGTCGCGGGG GCATTATGGA ATCTCCGATC TACGGTGATG
ATACCAGCCA TCTTCTACCC GCAACTTCTG ACAATATGAG CGATTCGGGG AACTTTGATT
CGGTTTTAGA ACTACTCACA AAAGGCTCAA ATCGTACATT GCCGGAGGCT GTTATGATGA
TGATTCCGGA AGCCTGGCAG GACAATGACA ATTTATCGGA CAAAAAGAAA TCGTTTTACG
AGTACAACTC AGCTGTAATG GAACCTTGGG ATGGGCCTGC GATGGTTGCC TTCACAGATG
GTCGTTACAT TGGTGCCACT TTGGACCGGA ACGGTCTTCG TCCCTCGCGC TACTATGTGA
CTAAAGACGA TCACGTCATG CTCTCCTCCG AAATTGGCGT CTGTCCCGAT ATCCCTGACT
CGGACGTTAA AGTCAAGCAT CGTCTGGAAC CGGGGAAAAT GTTTTTGGTC GACTTTGAAA
CGCAGCGCAT CGTGCCGGAC GACGAGATTA AGGAACAGGT TGCTTCGATG CACCCTTACT
CGGATTGGGT TCAAAACGGT ATGATCGATC TGGAAAGCTG GTCGAAGCAA AGCGGAAGCC
GAAGCGGTCC TATGGATTTT ACCCAGACCA ACCGCAAACT GAACATGTTT GGTTACAGTA
GCGAAAAGCT AGAAATGTTG CTACTGCCTA TGGCCGTCGG CGGCAAGGAA GCGCTTGGAA
GCATGGGAAA CGATGCAGCT CTTGCTGTTC TTTCTGAGCA GCCACGCCAA GTAAACGATT
ATTTCAAGCA ACTGTTTGCA CAGGTGACGA ACCCTCCGAT TGATCCTATA CGTGAAGAAA
TCGTGATGAG TTTGGTCTGC CCTGTTGGTC CCGAGGGCAA CCTACTTTCT GATCCGCAGC
AATCACATTG CGAGCGTCTG GTGGTCCGTC ACCCCGTACT CACTCTGGAT GAAATGGAAA
CTTTAAAGAA TCAGGAATAT AAGAGCACAA GCGGCGGTCA AGGATTTAAA ACGGCTGTAA
TTGATACAAC GTTTTCGGTA GGAAGTGGAC CGGACGGCAT GCTTCAGGTA CGTTGAGAAA
AAAGCTAAGT GGCAGTGGCA CAATTGTTAA ACTCTAGCTT ACACAGCAAC TGTATTCAGG
CTCTTGAACG AATCTGCGAT GAAGCAGCTG AAGCCATCCA GGGCCCTTTT GGCGGAAGCG
GCGTGGAGGG CGTTATTCTT TCTGATAAAT TCGCTGGTCC CGATCGAATT GCGCTGCCAT
CTTTGCTGGC CGTCGGTGCT GTCCACCATC ATTTGCTGAA AACGAAGCAA CGCCCTAAGG
CAGCTATTTT TGCCGAAGCT GGAGATGCCA AAGAAGTTCA CGATTTTGCG ACAATTTTCG
GATACGGCTG TGATGCTGTT TGTCCTTACA TGGCCTACGA AGCTATTTGC AAAATGAACG
AGGAAGGACA AATTGAGTCT AAAGCGAAGC AGCAGTTCAC GGACGAAGAG GCGATGCAAA
ACTACCGTAA GGCCGCAGCC AAAGGTCTTT TAAAAGTAAT GAGTAAAATG GGCATTTCTA
CGCTGCAGAG CTACAAGGGT GCTCAGGTTT TTGAAGCAGT TGGTCTTGCA GACGAAGTCG
TGGATCGCTG TTTCAGCGGA ACGACAACCC GCATCCAGGG CACCGATTTT GAAGCGCTTT
ACCGTGATCT GGAACGCTTC CATGAGAGTG CCTATCCTCC GATACCTTCG GATTTGGATG
ACTTGGTCCG CAGCGATGGG CAGTTCCACT ACCGGGACGG CGGAGAGGCT CATCTGAATA
CCCCTGCTGG AATGGTTAAC CTGCAAATTG CTGGCCGAAC GAACTCACGT GAAGCCTACA
AGGAGTTTGC GCGTCTCACT AACGAGCAAA ACAAGAAAGT CACCCTCCGT GGCCAGCTCA
AGTTTAAGTT TGACCCGACT AAGGCAATTC CTATTGAAGA AGTGGAGCCA ACGAGTGAGA
TTGTCAAGCG CTTTGCGTCT GGTGCCATGT CTCTGGGGTC AATCAGTCGC GAAGCCCATG
AGACGCTGGC TGTGGCAATG AACAGTATTG GAGGTCGATC GAACACTGGC GAAGGTGGTG
AAGACCCGAA ACGCTTTCTT GACAATCGTC GATCCAGTAT CAAACAAGTT GCCTCTGGAC
GATTTGGTGT GACATCCCAC TATCTGGCAA ATAGTGACCA GATCCAAATC AAAATGGCTC
AAGGCGCAAA GCCCGGCGAA GGTGGCGAAT TGCCCGGATT TAAAGTCTCG GAGTATATTG
CTGAGAATCG GCACACAACT CCAGGCGTTG GTCTGATTTC TCCGCCGCCT CACCACGACA
TTTATTCGAT TGAAGATCTA GCTCAACTCA TTCACGACTT AAAGAATGCT CAGCCAAAGG
GAGAGGTATC CGTCAAACTT GTGTCTGAAG TCGGAGTTGG TGTTGTCGCT GCAGGTGTCG
CCAAGGCTCT TGCCGATCAT ATCACAGTCA GTGGTCATGA CGGGGGCACT GGAGCAGCTG
CCTGGACTGG TGTGAAAGGA GCCGGTCTCC CATGGGAGCT TGGTCTTGCC GAAACGCAGC
AGACCCTTGT CTTGAATGGT TTACGTGATC GAGTTAAGTT GCAAACCGAC GGACAGCTGA
AAACGGGACG AGATGTTGCG ATCGCCGCGC TCCTCGGCGC TGAAGAGTTT GGCTTCGCCA
CGGCTCCACT AGTTGTAATG GGATGCATCA TGATGCGCAA ATGCCACTTG AACACTTGCC
CTGTGGGTAT AGCCACGCAA GACGAAGAGC TTCGTCGCAA GTTTTCTGGA CAGCCTGAGC
ACGTCATGAA TTACTTCTTC CTGCTTGCTG AGGAAGTTCG CGAAATTATG GCGAAATTGG
GGTACAGAAA TATGGCAGAA ATGATTGGAC AAACCCAGCA TTTGGACATC AACAAACGCG
GCCTTCACTA CAAAAGCCGT GGGCTGGACT TGAGTCCGCT TTTAACGCCT GCGTCAGAGC
TCAACCCGTC TGCCGGAATT CGCAATTTGA CCGGCCAATA TCACGGTCTC GACATTGCCA
AGGATATTGA TTTTATTGCA AAGGCGAAGG ATGCGTTAGA AAACCAGATC CCAGTTGTCA
TCGAAGACGA GATTGAAAAC GTCAACCGTA CTCTTGGAAC TATGCTTTCT TACGAGATCT
CTTCGCGATA CGGTACGGAG GGTCTTCCAG ACGACACAAT TCACCTCAAG CTTAAAGGAC
ATGGTGGGCA GTCTTTAGCG TTTACTCTTG CAAAGGGTAT CACGATGACA GTGGAAGGAG
ACGCGAATGA TTACACTGGT AAAGGCCTCT CAGGCGGAAA GCTTGCTGTT TACCCGACGG
CCGATGTCGT CGCAAGTGGG TTTGAAGCCG AAGAGCACGT TGTCGTGGGA AATGTTTGTT
TGTACGGTGC TACGTCAGGC AAGGCATTCT TTCGTGGAAA GGCGGGTGAG CGATTTTGTG
TCCGTAACTC CGGTGCCCTC GCTGTCGTCG AAGGTGTTGG CGACCACGGC TGCGAGTATA
TGACTGGTGG CATTATGGTT TCTCTCGGCG AAACGGGTCG CAACTTTGCT GCTGGTATGA
GCGGAGGCAT CGCTTACATC TACGACGCGG ATGGCAAATT TCCCGCCCGT TGCAACATGG
GCCTTGTGGG ATTGGAGACG ATTGATACGC CGGAAGAATC AGAAGAGGTG CACAGCTACA
TCAAGGAACA TGTTGAAATG ACCGGAAGCA GTACTGGTCA GAAAATGCTG GATAACTGGG
AGAATGAGGT CGGTAGATTC GTCAAAGTCT TCCCTCACGA TTACAAACGC GTGCTGATGG
AACGCGAGGC TCGGGCTGCA GAGGCTGCGT AACCTCTGCA CGATATGGTT TTGAATAATT
ACCTGTAAGA AATTTTACGT TTTTTTCTGC
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| Protein sequence | MISSACLVVR KGSRLSTFHR VSAVSLRRTL QRCTVPGITA LQNPLLRQRF YSTERIVQLR
SGRREDDLPK TLYDAKNEKE NCGVGLIASL KSVPSRAIVE RADEMLVRMA HRGGCGCDPA
SGDGSGMLFG MPDSFMRARA KELFQAELPA VGEYAVSNIF FPPGSHVNGK MDECKAILDR
LVKESKHTTL GWRPVPVNNS QLGKDPLDSE PITQQLIVIN DRKIPNKAFE QDLMKIRKMA
EDEVAVIQGP ESGFYVNSLT SHHITYKGQL TPEQVSQYYL DLQDPSFISH LALVHSRFST
NTFPSWERAQ PIRMMCHNGE INTLRGNKNW MYSRGGIMES PIYGDDTSHL LPATSDNMSD
SGNFDSVLEL LTKGSNRTLP EAVMMMIPEA WQDNDNLSDK KKSFYEYNSA VMEPWDGPAM
VAFTDGRYIG ATLDRNGLRP SRYYVTKDDH VMLSSEIGVC PDIPDSDVKV KHRLEPGKMF
LVDFETQRIV PDDEIKEQVA SMHPYSDWVQ NGMIDLESWS KQSGSRSGPM DFTQTNRKLN
MFGYSSEKLE MLLLPMAVGG KEALGSMGND AALAVLSEQP RQVNDYFKQL FAQVTNPPID
PIREEIVMSL VCPVGPEGNL LSDPQQSHCE RLVVRHPVLT LDEMETLKNQ EYKSTSGGQG
FKTAVIDTTF SVGSGPDGML QALERICDEA AEAIQGPFGG SGVEGVILSD KFAGPDRIAL
PSLLAVGAVH HHLLKTKQRP KAAIFAEAGD AKEVHDFATI FGYGCDAVCP YMAYEAICKM
NEEGQIESKA KQQFTDEEAM QNYRKAAAKG LLKVMSKMGI STLQSYKGAQ VFEAVGLADE
VVDRCFSGTT TRIQGTDFEA LYRDLERFHE SAYPPIPSDL DDLVRSDGQF HYRDGGEAHL
NTPAGMVNLQ IAGRTNSREA YKEFARLTNE QNKKVTLRGQ LKFKFDPTKA IPIEEVEPTS
EIVKRFASGA MSLGSISREA HETLAVAMNS IGGRSNTGEG GEDPKRFLDN RRSSIKQVAS
GRFGVTSHYL ANSDQIQIKM AQGAKPGEGG ELPGFKVSEY IAENRHTTPG VGLISPPPHH
DIYSIEDLAQ LIHDLKNAQP KGEVSVKLVS EVGVGVVAAG VAKALADHIT VSGHDGGTGA
AAWTGVKGAG LPWELGLAET QQTLVLNGLR DRVKLQTDGQ LKTGRDVAIA ALLGAEEFGF
ATAPLVVMGC IMMRKCHLNT CPVGIATQDE ELRRKFSGQP EHVMNYFFLL AEEVREIMAK
LGYRNMAEMI GQTQHLDINK RGLHYKSRGL DLSPLLTPAS ELNPSAGIRN LTGQYHGLDI
AKDIDFIAKA KDALENQIPV VIEDEIENVN RTLGTMLSYE ISSRYGTEGL PDDTIHLKLK
GHGGQSLAFT LAKGITMTVE GDANDYTGKG LSGGKLAVYP TADVVASGFE AEEHVVVGNV
CLYGATSGKA FFRGKAGERF CVRNSGALAV VEGVGDHGCE YMTGGIMVSL GETGRNFAAG
MSGGIAYIYD ADGKFPARCN MGLVGLETID TPEESEEVHS YIKEHVEMTG SSTGQKMLDN
WENEVGRFVK VFPHDYKRVL MEREARAAEA A
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