Gene PHATRDRAFT_49523 details

Gene Information

• Locus tag: PHATRDRAFT_49523
• ID: 7195855
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011690
• Strand: -
• Start bp: 503291
• End bp: 505362
• Gene Length: 2072 bp
• Protein Length: 584 aa
• GC content: 52%
• Product: predicted protein
• Protein accession: XP_002184265
• Protein GI: 219128111

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.047501
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CAACAACAAC ACTTGCGGCT CATAATCCGC TGTACTCATA TTATTCATCT CAAAAACGCC 
ATGAAGAATA CGTCGGGTTG CTTCCTTGCC AACCCGTCCA GGCGTAGTCG CCTCGTTCGT 
AGCTACTCGT CGGCGTTACG ATGCGGCGTG CTGGTCTGGC TCGCCGTCGT TCGCGACGCG 
GTGCTCGCGC AGGAATGTGC CACCGACGGC ACCACGTGCG ATAAGCACTC GCGTTGTCCC 
GTGTGGAAAG AAGAAGGCGA GTGCATGCGG AACGCCAAGT ACATGAAAGA ACACTGCCCG 
GTATCCTGTC GGGACATTCA TCAGGAAGCC GTAACTATAG ACTGCATTGA TCTCCACGAA 
CGCTGTCCCG TCTGGGCTGG CTTGGGAGAA TGCAAGAAGA ACCCCATCGA TATGAACCGG 
TACTGTTCCA AATCCTGTAA GCAGTGCGAA GACGACAACG ACGGAAAAAA CAACGAAAAG 
GAGAAACGTG GGGACCCAGA CAACAACAGC AAGACGGCCG ACGACGACGA CGATCCCCAA 
TGTCAAGATG GGGACAAAAA TTGTCCCTAT TGGGCGAAAA ATGGCGAATG CCAAACCAAC 
AAGATTTGGA TGACCAGTAA GTTTAGTTCC GAGTACATGT ACTATTCGTA ATAGTACCCT 
TGTATATGAT AGTCTCACCT CCCAACGAAC ACTTGTACTC GCGCGAAATA ACTCCTTCAC 
CACCGACTCA CTCCTTGCCT GACGAAAAAT GTTACAGCCA ACTGTCCCAA ATCGTGTCAA 
ACGTGTGAAG AAATCAAGCC CAAAACACCT CGGCGCGCCT CACAGATGAA ACCGGCCGAA 
GTCCAAGAGA TTTTGCGAGC GTCGGCCTCC TTTGGCGAGC CACAAACCGC AGAAGGATCC 
CAAACCTCCG ATACAGTTGA CATTGTTCGA GCTTCGATAG ACTACATGAA TAGTGAGGAC 
GTCCAGCAAC TACCATCGGC GATTGTGGCG TCCTGTCGCA ATCAGCACCA TCTGTGTTCC 
TTCTGGGCCT TGATCGGAGA GGTACGGCAC GTTAGCAGCT CGGCGATACG GCTGCCCCGT 
TACCCTATGA AACTCAACCA CTCTATCCCT TTGTCTTTTT TTTATATATT TTTTATTCAC 
ACCCCACTGT TTTTTAGTGC GACGCCAACA AATCGTACAT GCGTACCAAC TGTGCCCCCG 
CCTGTCAAAC CTGCCAACTT ATCGACATCG AAAACCGCTG TCCCCGTCTC GAACACGCCG 
AACCCGCTCT CGTACCGGGT GATCTTAACA AGCTCTTTGA TCGCATTGTG CGGACGGCTC 
CCGGCAACCG CACCTTGACC GAGGCCGAAC GACAGGAACT AATTGATCAA AAAATGCATT 
TGTACACCGC GCACGTGCAT TCTCGTCCCA GTGCGAACCC CGTGGTTGAA GTTAGTACCG 
TCCTCGACAA ATCGTTGCCA CCATGGGTCA TCACTCTCGA CAACTTCTTG ACGCTCGAGG 
AATGCACCGA ACTCATCAAC ATTGGACACA AGCACGGCTA CAATCGCTCC AAGGATGTTG 
GGAAAGTCAA GGTGGATGGC ACCCACGAAG CGGTGCAAAG CACGCGACGT ACTTCCGAAA 
ACGCCTGGTG TTCCAATCAA AGTGGCTGTC GCGACGAAGC TCTCCCGCAG CTCTTGCACG 
AGCGCATGGC GACGGTCATG CGCATCCCTG CTCAGAATAG TGAAGATTTT CAGCTTTTAA 
AGTACGAAAA AGGGCAGTTT TACCGAACGC ACCATGACTT CATTCAGCAC CAGACGAAAC 
GGCAGTGTGG ACCGCGGATT CTTACTTTCT TTCTGTATTT AAGTGACGTG ACGGCGGGCG 
GTGGGACCAA CTTTCCTGAT CTCGACATTA CCGTTGAACC CAAAGCCGGT CGCGCATTGC 
TGTGGCCCAG TGTGTACGAT TCCGATCCCA TGGCCAAGGA CGGACGCATG ATGCATCAGG 
CGTTGGAGGT GGAAGACGGT GTCAAGTTTG CTGCCAATGG ATGGATTCAC TTGTACGACT 
ACGTGACGCC CCAAAGCATT GGTTGCACTT GA 

 

Protein sequence

MKNTSGCFLA NPSRRSRLVR SYSSALRCGV LVWLAVVRDA VLAQECATDG TTCDKHSRCP 
VWKEEGECMR NAKYMKEHCP VSCRDIHQEA VTIDCIDLHE RCPVWAGLGE CKKNPIDMNR 
YCSKSCKQCE DDNDGKNNEK EKRGDPDNNS KTADDDDDPQ CQDGDKNCPY WAKNGECQTN 
KIWMTTNCPK SCQTCEEIKP KTPRRASQMK PAEVQEILRA SASFGEPQTA EGSQTSDTVD 
IVRASIDYMN SEDVQQLPSA IVASCRNQHH LCSFWALIGE CDANKSYMRT NCAPACQTCQ 
LIDIENRCPR LEHAEPALVP GDLNKLFDRI VRTAPGNRTL TEAERQELID QKMHLYTAHV 
HSRPSANPVV EVSTVLDKSL PPWVITLDNF LTLEECTELI NIGHKHGYNR SKDVGKVKVD 
GTHEAVQSTR RTSENAWCSN QSGCRDEALP QLLHERMATV MRIPAQNSED FQLLKYEKGQ 
FYRTHHDFIQ HQTKRQCGPR ILTFFLYLSD VTAGGGTNFP DLDITVEPKA GRALLWPSVY 
DSDPMAKDGR MMHQALEVED GVKFAANGWI HLYDYVTPQS IGCT