| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49505 |
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| Symbol | |
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| ID | 7195729 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011690 |
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| Strand | - |
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| Start bp | 446826 |
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| End bp | 448590 |
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| Gene Length | 1765 bp |
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| Protein Length | 456 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002184253 |
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| Protein GI | 219128086 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0369192 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | AATCAAGGCT AACTGTAAGT CGTATTGTGA AACTTCGATT CTCATTGCTG ATTACATTAC
AGTAAACCAC AGCAGAGCGT GGAGCTGTTT GCGAAGCGTT CATATTTTGA GTGACGTACG
CATTCTTGAT GCAAAGAGAA GCGATAGTTC GACAGCGCCG CAGCAACTTC AGCGGTGTTG
TCAAAGACAC GATGGCTCCT GAAAAATAAA AGAGTATGCA ATTCAAGACA ATCATCGAAC
CATTTCGGAT CAAGACGGTG GAATCCATCC GTCGGACCAC ACGCGAAGAA AGATTGAAGG
CTATTGAAGA GGCTGGATTT AATTTGTTCC TTTTGGATGC TGACAATGTA CTAGTTGACT
TGTTGACCGA CTCGGGTACG GGCGCAATGT CTGCCAAACA GTGGGGTGGG ATGATGCAAG
GTGACGAATC TTATGCCGGT TCAAAATCGT TCTATAAATT TAAATCAGCT GTACAAGGCA
TCACTGGTTA CAAGCACGTC ATACCAACGC ATCAGGGTCG AGCAGCAGAG AGAATCCTCT
TTGGTTCTGT CTTGAAGGGT GGTGATATCG TGCCAAACAA CACGCACTTT GACACAACCA
GAGCTAACGT CGAACACCAC AAGGCCGTGG CTTTGGACAT TCCCATATCG GAAGCACGAT
CCCCTTCTGT CGTCCTTCCC TTTAAAGGAA ATATAGATCT TGAACTGTTG GAAGAGCAAC
TATTGCGCAA CAAGCAAAAA ATACCGATCG TGTTTGTCAC CATTACGAAT AATTCGGGAG
GTGGACAGCC TGTCTCAATG GCAAACATCC GTGGGGCAAG TCACATTTGT AAAAAGTTCA
GTGTTCCCTT TTTTCTCGAT GCTTGCCGTT TCGCGGAGAA TGCCTGGTTT ATCAAAATGC
GCGAGGAGGG CTATGCCGGC AAGTCTCCGC TAGAAATTGC ACAAGAACTA TTCAGCCTTG
CCGATGGTTG CACCATGTCA GCTAAGAAGG ACGGCTTGGC AAATATCGGA GGCTTTTTGG
CACTGAACGA CGATTGTCTA GCCCAGGCGT GCAAGAATGA ACTGGTAAGT TACCTGCAAC
AAAGGAGAGC CCTTCGTACA ATTGTTCCAT TTATTGTCTT ACAAAGTGTT CCCCGCTGTA
GATTCGCACT GAAGGGTTCC CGACGTATGG AGGGCTGGCC GGGTACGACC TTGAGGCTAT
TGCTGTCGGT ATACAAGAAG TACTTGAGGA GGATTATTTA GCGTATCGAA TACAATCCGT
TGCGTATTTT GGCAAGCAAC TGACCGATGC CGGGATACCG ATTGTCCAGC CACCCGGAGG
CCACGCGGTC TACATCGATG CCACAGCTAT GCTTCCCCAC ATTCCCGTCT CCGAATTTCC
GGCATGGGCT CTTTCTCTTG CACTTTATGT TGAGGGCGGT ATTCGCTCTG TCGAGATTGG
GTCCGTTATG TTTGGACAGG AGACACCGGC TTCGATGGAG CTGGTTCGAC TGGCATTTCC
ACGTCGGGTC TACACACAGT CGCATGTGGA CTATGTGTCC GAGGTCCTTC GCTACATCAA
TGAGCATAAG AGCAACATCC ATGGCGTTCG TATTGTTGAG CAGCCAGCGG TTTTGCGTCA
CTTTAGTGCC AGATTTGAGC CTATTGGAGG TTCTCTCCAA TAGCTGCAGG CATCCAACCT
AGGCGTATGT CGATTCCAGA CAATCGCCAC AGTAAACTTT GTAGCAAACT AGATAACTGC
GCATATAAAC ATTGCTAGAC TTTGC
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| Protein sequence | MQFKTIIEPF RIKTVESIRR TTREERLKAI EEAGFNLFLL DADNVLVDLL TDSGTGAMSA
KQWGGMMQGD ESYAGSKSFY KFKSAVQGIT GYKHVIPTHQ GRAAERILFG SVLKGGDIVP
NNTHFDTTRA NVEHHKAVAL DIPISEARSP SVVLPFKGNI DLELLEEQLL RNKQKIPIVF
VTITNNSGGG QPVSMANIRG ASHICKKFSV PFFLDACRFA ENAWFIKMRE EGYAGKSPLE
IAQELFSLAD GCTMSAKKDG LANIGGFLAL NDDCLAQACK NELIRTEGFP TYGGLAGYDL
EAIAVGIQEV LEEDYLAYRI QSVAYFGKQL TDAGIPIVQP PGGHAVYIDA TAMLPHIPVS
EFPAWALSLA LYVEGGIRSV EIGSVMFGQE TPASMELVRL AFPRRVYTQS HVDYVSEVLR
YINEHKSNIH GVRIVEQPAV LRHFSARFEP IGGSLQ
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