Gene PHATRDRAFT_49494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_49494 
Symbol 
ID7195837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011690 
Strand
Start bp412010 
End bp412849 
Gene Length840 bp 
Protein Length235 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184131 
Protein GI219127832 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TCCGAGGATT TTCAGGTCGA AGACTTGTTG TGATTGACTT GTGAATAGCC AGCCGTACGG 
ACTTGTCCCG TTTGTTCTGT TCTAGAGAGA TGTCCACAAG TCCATTGGTG TCGGTGCGTT
CGGCCGAAGA AATGGTTGCC GTTTCGCCTC TGAGCAAAAT GAATTCTTTA CAGAATGATG
CCGACAGCAG CTCCATCGCC AGCACTCCGA ACGGTAGTTT CAAGGATGCG AATGTCACTT
GCCTACCTTC TCTAGAGAAC GAAGGGTTGG ATGACAGCCA GCTAGACCGT GAGGAGCAAG
AATCCTTGGA ACTCGCTCGC ATGCTCATGG CGGAAGAAGC AATGGCAGTT TATGAAAACT
CGTTTCAGCT TCTCCGAGAA TCGGCCGATC AGCTGTCACA GGAAGACTAC CAAGCGATGC
AGGAACTACT TCGCGAAGAA GAACGCGAGC AGGTAGCCGA ACTAGAAGAC GACGAGGGAG
AGCTTTCTTA CGAAACAATG TTGGAGATAG GCGAGCGAAT TGGAGACGTC AAGACGGAAC
GCTGGACCTT GGACGCGCAG CGTCATATTC ATAAGCTTCC CACTGTTGTG TACCGCTCAT
CAAACGTCGG TGCTGACGTA GATGATTCCG AAAGCAAGTG CTTGGTATGT CAAAGTGAAT
ATGAGGAAGA GGAGCGCCTA CGTCGGCTAC CGTGCGGACA CAGTTTCCAC GCGAGTTGCG
TTGACCAGTG GCTCAATACA AAGGATGTGT GTCCATATTG CCGTACGTGC ATTGTCGACG
AGCGAACGCA GCGTTAGCAC ACTGGCAAAC AATGTTTTCT CATAATATAT AGAGCAACTC
 
Protein sequence
MSTSPLVSVR SAEEMVAVSP LSKMNSLQND ADSSSIASTP NGSFKDANVT CLPSLENEGL 
DDSQLDREEQ ESLELARMLM AEEAMAVYEN SFQLLRESAD QLSQEDYQAM QELLREEERE
QVAELEDDEG ELSYETMLEI GERIGDVKTE RWTLDAQRHI HKLPTVVYRS SNVGADVDDS
ESKCLVCQSE YEEEERLRRL PCGHSFHASC VDQWLNTKDV CPYCRTCIVD ERTQR