| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49480 |
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| Symbol | |
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| ID | 7195946 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011690 |
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| Strand | + |
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| Start bp | 377020 |
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| End bp | 378512 |
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| Gene Length | 1493 bp |
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| Protein Length | 486 aa |
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| Translation table | |
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| GC content | 55% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002184119 |
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| Protein GI | 219127806 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAGC TCGCGCGGAC GATGGCGTCG TCTTGCGCTC GTCCGCAATG GCAAACACAG
GATCGTACTG TGTACATAAC GTATTGTCGT TTCGGAGCAA TCAAACAAGC ACGTCCGCTA
CATTTGCGCT GCATCCGACG ACTCGTGAGC GTGTGTACAG AAACGCAGGA TTTTCCTGTA
CGGAGCCTAC CCGCACAGTT TTTACGGGCG GCAGATCCAT CCAACTACGA TGCCAACGGC
CAACGCGTCG ATGTGGCCTA CGATTCAGAA ACGGGCAAGC CCATGCATGT GAGCTCTTCC
AAGACAGATG TCGATATTCG AGACTGTGTT TTGGTCGACA ATGCATACCG AGTCACATGG
AAGGATGGCC GTGTATCCGA ATACACGAAA GCCTGGGTGC AAGCTCAGGT GGAAAGTTGG
CAAGGCACAC AGTACAAAGT GGAAGAAAGT AGGAAACGAG TGTTGTGGAC GGGCTTTACC
GCTGAATCGG TACGGTCGTC TACGGAATTG TATTTGCAGT TTGGTGATGT CTTACAGCCT
ATTGGATGGA AGCAAGCCTT GCGGTCGTTG TATCGGTACG GGATCGTCTT GGTCCGAAAC
ACACCCACAA CCGATGGAGG CGCCGGAATC GCAGCTCTGG CAGCCGCCAT TGGTGGCGGA
TCCGTGAAGA ATCACACCTC TCTTGTACCG GGATATTTGG ATGGTAGTAG CGACGTGATT
TGTTCACCGC AAGGTACGGA CGGACCGCTG CGCACCTTGT ACGGGACGGT GTGGTCTACG
ACGTCGTCGG GACAACCAGT CGGAACCAGT ACGGCCGATT CCGCCTACGG GCACGCTAGC
CTACCTCTGC ATACGGATAT GACTTACATG CGTGATCCCC CTGGTCTGCA GATCTTCACT
ATGGCCCGTC CGGCGACCAA GGGAGGGGAA AGTGTGTTTG GTGACGGGTT CGCCGCTGCC
GAATTCCTGC GCGGGACCAA CCCGGCTGCT TTTGCAACTC TCTCGAGCAC CACTCGTCGC
TATCGTAGCG TGGATGCGTC CACGGGTTGG CATTTGGAAG CTTCGGGACC AATCATTACG
GTACTAGACC GCAATGGTCA CCAAGACAGT GTGGTGGGCA TTCGCCACAA CGATTTAGAT
CGCTTACCGG ATTTGCCTCC ACCTAGCGCT GATCCGGACG AATTTTACAG CCAATTGATC
GAGGCACATC AGGCGTGGGA CGAGATATTA GCACGGGACG ATTTCCGACT CGTCATTGGT
TTGGAACCGG GGGAAACCAT GGTGGTGGCC AACCAGGTAC GTCGGAGGCA GGGTACACGG
ATGCGTAGGT AAAGATGTCT GGTTTGGACC GGATGCTACC GTCGACCGAC CCTTTTGAAT
CGGCACGGCA CGTCACGTAT CTCACCTTTT TCCGACCGTT TGTCAATTTT AAAAGCGCTG
TTTCCACGGA CGCTTCAGTT TCGACACTAG CGTCGCATCG CCGCGTTCCG TGA
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| Protein sequence | MSKLARTMAS SCARPQWQTQ DRTVYITYCR FGAIKQARPL HLRCIRRLVS VCTETQDFPV
RSLPAQFLRA ADPSNYDANG QRVDVAYDSE TGKPMHVSSS KTDVDIRDCV LVDNAYRVTW
KDGRVSEYTK AWVQAQVESW QGTQYKVEES RKRVLWTGFT AESVRSSTEL YLQFGDVLQP
IGWKQALRSL YRYGIVLVRN TPTTDGGAGI AALAAAIGGG SVKNHTSLVP GYLDGSSDVI
CSPQGTDGPL RTLYGTVWST TSSGQPVGTS TADSAYGHAS LPLHTDMTYM RDPPGLQIFT
MARPATKGGE SVFGDGFAAA EFLRGTNPAA FATLSSTTRR YRSVDASTGW HLEASGPIIT
VLDRNGHQDS VVGIRHNDLD RLPDLPPPSA DPDEFYSQLI EAHQAWDEIL ARDDFRLVIG
LEPGETMVVA NQVKMSGLDR MLPSTDPFES ARHVTYLTFF RPFVNFKSAV STDASVSTLA
SHRRVP
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