| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49469 |
|---|
| Symbol | |
|---|
| ID | 7195821 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011690 |
|---|
| Strand | - |
|---|
| Start bp | 328262 |
|---|
| End bp | 329853 |
|---|
| Gene Length | 1592 bp |
|---|
| Protein Length | 522 aa |
|---|
| Translation table | |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002184231 |
|---|
| Protein GI | 219128040 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.141082 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CGCAACAACG CCAACAATCG ACCATGGGAT TTTCGACTGC TGAGCGCAAT CGCCGAAAGA
GAGAGCGCAA AAAGCGCGAG CGCGAAGACC AGCGTAAAGA GGAAGAAGCC GAAAACCAAA
AAAGCGCGGA AGTGGCGAAA GCAGATGAGG ACGATGAAGA CGAGGTGGAG GTCGAATACG
TTGCCGAGCC CATCTTGCCA GCCGATGAGG CGTTTGACGC TTTGCGAAAG TTTCAGGAGA
GAGCTGCGGC TGTGGTTGTT TCGGATGACG ATCGTGGTGA ATATTCCGAA GCGAAAAGTG
TAGATATCGA GGGCGGACAC GAGGAGTCCA ATGAAGATGA GGAAGATGGT GGTGCGGTCA
GCAAGCGAAA ACTTCGCGAA TTGTTGCGTC CATCAGTTGC CGAACTCAAG AGGCGTGTAC
TTCGCCCTGA CTTGGTAGAA GCACATGACG TGACCGCCGC CGATCCGGAT TTTCTCATCG
AGCTCAAGGC AGCTGCTGGC ACAGTACCTG TCCCGCGACA TTGGGGTCGG AAGCGTAAAT
ACCTGCAGGG CAAGCGGGGT TTTGAAAAGC CGCCATTTCA ACTCCCTGAT TTCATTATCA
AGACCGGTAT TACCGAAATT CGTGATACAG TCATGGAGGC TGAATCAGAC ATGTCTGCGA
AACAGAAAAA TCGTTCGCGC GTTGCTCCCA AAATGGGTGC CATTGATGTC GATTACAAAA
CTCTACACGA TGCCTTTTTC AAGCATCAAA CTAAACCGGC AAATCTCACA AAGTTTGGAG
ATACCTACTA CGAAGGAAAA GAGCTCGAGG TACAGGCAAA GGTGCAGCCT GGAGGGCCGT
TGAGCCAGAA ACTCCGGGAT GCGTTGGGCA TGGCTTCTGA ATCCTCGCCG CCACCGTGGC
TGCTGAATAT GCAACGTTAC GGACCACCAC CGAGCTATCC GTCTCTCAAG ATTCCTGGTT
TAACTGCCCC GTTGCCAACA CAAGAGTGTC AGTATGGCTA CCACCCAGGT GGCTGGGGAA
AGCCACCGAT TGATGCCTAC GGTCGCCCAC TGTACGGCGG CAATCCTTTT GACGCCCCCG
GTACCGGATC TCGCAAGGAT ACTACCAACA GTGCCCTTGT GACAAGCGAC GGCAAAACGA
TTGCCAAAGC ACAATGGGGA GCGCTACCAA CAGGCTTTGT CGACGATGCC GAAGCGTCGG
AAGAAGAGTC GAGCGACGAA GACATGGAAG AATCAAGTGA GGAGGAAGAA GAATCAGAGG
TTACGGTTGT CGATGGTACA GATTCAGTAT TGTCTCCACC TCCGAGCTTG ACATCCTCAG
GACCCATGGA TCTACGCAAA CAGCATGGGA ATGAAACACC TATGGATCCT TCGGCGCCGA
AGCAACTCTA TCAGATTATT GACCAAACCA AGGCCGTTAC TTCTCAGGGA ACTGTCTTTG
CTTCTGAAAT GTCCTATCTG GTTCCAGGAC TACAATCAGC TATACCTGAG GGTGCCGAAA
GCGTTTTATC CAAGGCCTTA CCAGCTGGTG AATCGTCCAA GCGGAAAGGC AAAGATGAAG
ACGATGATAT TGGCAAGAAC TTTAAATTCT AG
|
|---|
| Protein sequence | MGFSTAERNR RKRERKKRER EDQRKEEEAE NQKSAEVAKA DEDDEDEVEV EYVAEPILPA
DEAFDALRKF QERAAAVVVS DDDRGEYSEA KSVDIEGGHE ESNEDEEDGG AVSKRKLREL
LRPSVAELKR RVLRPDLVEA HDVTAADPDF LIELKAAAGT VPVPRHWGRK RKYLQGKRGF
EKPPFQLPDF IIKTGITEIR DTVMEAESDM SAKQKNRSRV APKMGAIDVD YKTLHDAFFK
HQTKPANLTK FGDTYYEGKE LEVQAKVQPG GPLSQKLRDA LGMASESSPP PWLLNMQRYG
PPPSYPSLKI PGLTAPLPTQ ECQYGYHPGG WGKPPIDAYG RPLYGGNPFD APGTGSRKDT
TNSALVTSDG KTIAKAQWGA LPTGFVDDAE ASEEESSDED MEESSEEEEE SEVTVVDGTD
SVLSPPPSLT SSGPMDLRKQ HGNETPMDPS APKQLYQIID QTKAVTSQGT VFASEMSYLV
PGLQSAIPEG AESVLSKALP AGESSKRKGK DEDDDIGKNF KF
|
|---|
| |