Gene PHATRDRAFT_49426 details

Gene Information

• Locus tag: PHATRDRAFT_49426
• ID: 7195798
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011690
• Strand: +
• Start bp: 220793
• End bp: 222996
• Gene Length: 2204 bp
• Protein Length: 449 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002184086
• Protein GI: 219127738

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ACTTGTCCAA GACTCTCCAG TCTACTCGTA GATATAGGTA ACCGTCCTTC TCCTTTCCTC 
TACTAGCAGT AGCAGAAGCG CAGAAAGAAT CATAGATCAC CACGGCATCG TCGTGTCACG 
TCCCTTCTTC TGTTCACGCA CTACTCTATT TGCTTTCGAC ATGCTCCAGT TCCCCCCCGT 
CCTTACCGCG GTGACCTTGG CCTGTACCGT AGTCTTCACT CGGGCGCAGC AGCAATCGTC 
CCCCGTAGAC TATGGTGTCG ATGTTGTAAG CTCTTACTGT GTGCCTCGCG CCGGTTCGTT 
TCCCCCCGCA TTTCGTATCA TTCATCTCAC CCAACTCGCA TCATTCGACG CAGTCCTTCC 
CAATGCACCA CGCCGTTCCG TCCACCAACT ACGCTTGGTT ACCGCACAAC ATGGATCCTT 
CCCTCCCCAC ACCTCCCGAA TATCAGGACA TGTCTGTCCA ACCCCTCGGG GATATGAAGG 
CTAAACACGA ACACTTCATG AACGGCTGCT CCGATTATTA CGAAAGCATG GGTGATCGCT 
GTTGGTCGAA CGAACGGGAT CGGATCACAA TGAGCCTGCG ACAACCCCAG TCTATGCGCA 
ACTACACCGA ATTCGGCTTT ACCAAGATTC GGGCCCCGGA TCACGTCTTT TCTCTGATTC 
AGGAATTTTG GCAAGCGAAC AAGGACAAGC AAAAACTGGA ACGGTGGCCG GCTGGTAACA 
TTTATACCAA TCACTGGGAA TCGCCCACGT ACTTGGTTTC CGTGGTGCGT GGAGAGTACT 
CTAATTCCAT TCGTTCGCCA ACAGAGTACC GAGCGGAGAA CACGATACCT TTTACCCACA 
ACTGACACTC TCATTGATTT TCTATACTAA CTTACAGGAA GATACTTCCC TTGATGGAGG 
AGGTTTTGTA CTGAAACAGC ACATCTGGAA CGCCGCCCGG GATACCATTC AGGATTGGAC 
GGGTCAGCAA TTGGCCGAAT GCAGTCTGTA CGGCATTCGG GTTTACAAAG AGGGTGCCAT 
ATTGTCACCG CACGTAGATC GATTGCCGTT GGTCGCTTCG GCGATCATCA ATGTCGATCA 
GGACGTTGAT GAGCCCTGGT AAGTTTGCTA CCGTAGCTGT TTCTTATGAG CGTTCTTTGG 
TGTACGACAG GTATTCTCAC TGCTCGTTGC TGCCATTGTA GGCCACTGGA AGTGATCGGA 
CACGACGGTA TTGCACGTAA CGTCACCATG GAACCAGGAG ATTTGGTTCT CTACGAGTCG 
CATTCCGTCT TGCATTCGCG TCCCTTCCCG CTCAAGGGAC GTTTCATGAG TAACGGTACG 
TGTCGCGCCT TACTACTTCG GGTCTTTCCC GAGTCTGTTG TTGCACGTAG TGCTTACGAT 
GCGTGTATCT GTTTCTTTCC AGTGTTTATT CATTTCGAAC CAATTGGACC GATTGCTGGG 
CAGATTGAAT ACACCGGAGA CCTTCCTCCT TACTTAATTC CCGGCAGCCC GGAGGAGAAA 
AATTGGCGCA GAAGTAATCC CAATGGGCAC AAGATTGTGG GAAATCGCGC TTTCGCTACC 
GGCTCGACCG AAGCTCACCA CCACGCTAGC AAGGGTGATT TGGAACAGCT GCAGCGCATT 
TTGGACAAGA ATGCGGACTT GGTTAATGCG CGAGACAAGA ACGGTTGGAC TCCCTTGCAC 
GAAGCGGTCC GTACCGGAGA CGAACGCCTC GTTGAGCTTT TGTTGGATCG GGGCGCCGAA 
GTGAATGCTC GCACGGGGGA GAAAGGAGAA GGCGGTACTG CTCTTTGGTG GGCGCGCAAA 
TTTAATGAGG AAGAAAGTCC AGTGATGCGC CTCTTGAAAG AACGTGACGG CAAGTTTTAC 
GGACCCAACA CTGAGCTTTG AAGCTAATGC GACCGCAGCG CACCAGCCTA GAGGAACTGT 
GGATTTCGGT GCACATTCCA CAGTCACTTA CGTACTTTGT TCTCGTGTTG GCGAATTAGA 
GGAAAGGAGG TCCAGAAAAG TGAGGTAAGG GCTGCTGCAC TTGCTCAACA GAGGAAAGCC 
TTCCGGTTTC ATTATAGAGC CACGTTTCAT CATGCTAGAG ATCTATTTTT GTTCGTCATT 
TTCAAGGATA GTTGTTGTGT GTGCTCCCTA CGTAGCAGAA TCTAACAGCA AAGGGAGCAA 
GCAACTTTGC TCTACATTTT TTTCTAGAAT TGAGCTCTGC CTAC 

 

Protein sequence

MLQFPPVLTA VTLACTVVFT RAQQQSSPVD YGVDVSFPMH HAVPSTNYAW LPHNMDPSLP 
TPPEYQDMSV QPLGDMKAKH EHFMNGCSDY YESMGDRCWS NERDRITMSL RQPQSMRNYT 
EFGFTKIRAP DHVFSLIQEF WQANKDKQKL ERWPAGNIYT NHWESPTYLV SVEDTSLDGG 
GFVLKQHIWN AARDTIQDWT GQQLAECSLY GIRVYKEGAI LSPHVDRLPL VASAIINVDQ 
DVDEPWPLEV IGHDGIARNV TMEPGDLVLY ESHSVLHSRP FPLKGRFMSN VFIHFEPIGP 
IAGQIEYTGD LPPYLIPGSP EEKNWRRSNP NGHKIVGNRA FATGSTEAHH HASKGDLEQL 
QRILDKNADL VNARDKNGWT PLHEAVRTGD ERLVELLLDR GAEVNARTGE KGEGGTALWW 
ARKFNEEESP VMRLLKERDG KFYGPNTEL