| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49422 |
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| Symbol | |
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| ID | 7195796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011690 |
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| Strand | - |
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| Start bp | 212128 |
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| End bp | 213992 |
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| Gene Length | 1865 bp |
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| Protein Length | 537 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002184206 |
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| Protein GI | 219127988 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000496723 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CATGTTTGTT TATCTGATCG CGACAATTGC CGTCTGGCCA CCATTGTAAG CAGCAAGCTA
CTTCTACACG CTTGCCAAAG CTTTATTTTC TCATGCCTAG TAGAAGACGG CGAAGCAACA
ACCTATTTTT TGAAGCCTAC TGCGTCTTTC TTCGCTACCC CAGAACAATC GCTGTAATTT
TTTCCTTGCT TAATCCGAGC ACTTCATTCC AGCTACGCTC AGATCAAAGG ATCAGGCTTC
CTGCCATGGG TCTCGCGGCG TCGACCCCGA AACAAGAGAA GAGAAGTGAA CCAGAACAAG
CTCCAGAAAC GAAACAGATC AAACGAAGAC ATAAGACCGA GGAATGGAAA ATAGCCGTTG
ATACGTTTGC AAAGCAAGTT CTGGATCCCT CCTATCTTCA CCTCCCAGTT CGAGCGAGTA
CTATGGAGGC AGCGTCCTTT TATCCGTCGG AAAACAACGA GCAAGCATGC TTGATGCCCG
GGACGCACAA GCATCTCGGT GGTGCGTACG ATGCTACGGA TGGTTGCATT TACGGCATTC
CAGCGAGTGC AAAAGCCGTC ATGTGCTTGT ACCCCGATGG TGATAAATAC AAGATGACCA
CAATTCCATT ACCGGAGGAT GCAGCAAAAA CAACTTACAA ATGGTTGCGT GGAATTTTCG
CAGATGGCTA TCTCTGGGCG ATTCCGGCAT GGGCGGACTC TGTACTCTGC GTTGACGTGG
ATGCTTTCTG GGGACGACGT CCAGCTTCTG GCGAGGTTGT CCAATTGATT CCTCTTCCAG
ATGAACACCC TAAGGATATG CGGTGGCAGT GGCACGGTGC TGGGATGAAT AGAGAAAAGA
CGGCAATCTA CTGTATTCCA TCCAATGCCC AAAGAGTGCT CCGGGTCGAC TTACGAATGA
AGACTACTTC GCTGATACCA ATCGAGTACA ATCCTGACAA ATACCCGAAC TTTCGAATTG
AATTGGCAAA CAAGTGGTAC GGTGGTATTC TTGGGGAAGA TAATGCTGTT TATGGAGTAT
GCTATCGCAG TTGCGCCGTT TTACGAATCG ACTGCGAATC TGATACCGCA TCACTTGTTG
GCCCCGATTA CGGATGTGCA GGATACAACT GGCATGGTGG AGTCAAGACA AATGGAAAGA
TATACGCGCA TCCCTCACAC GCACCCGATT CAGTGTTGGT TATCAACACC AATCCCGACG
ATCACAAAGA GGACCCATGC TCGGAACTGC CAATCAAACG CGCCGAATAC GACAAAGACA
TCAGAATAAA TTACAAATGG CTCGGTGGGG CCATAGGGGC AGATGGCAAT ATTTACTGTC
CTGCATGCGA TACGTCCTCC GTACTCAAGA TTGATACACA GACTGAAGAG TGCACAACTT
TTGGGTTTGT GGGAACTTTG AAGAATAAGT GGCAAGGTGG TATTTTGGGT CGGGACGATT
GCATATACTG CATACCTGCG TCCGGACACC ATGTTTTGCG TATCTTTACT AGTCCAGACA
TAGTTGGAGA GAATCCGATA CAATTAATCG GGCAGATGCC GGTGCACAAG GACAAATGGC
AAGGAGGCCA CGTCGGAAAG GATGGGGCTT TGTACTTCAT TCCTGAGAAT GGATACCGTG
TTTTGAAAGT TACGCCACCA AACGCGCCAC CAAGTCTTGT CAATGGAAAG CTGCCGGAAG
GCGATGTGAA AATAGAAATG ATGTAGGTGG TAGCGACTTC ACTGCCAATT TCTGGTGTAG
AATGCAATCC ACACCACTTG TTCCTCTGAT TATAACACAA TAACAAAAGC ATGTGCTCCC
AGCCACAACT ACGGCCGAAA GCAATACTTT CCCATTTAAA GGAATAATAA CATCCAAGAC
AACTG
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| Protein sequence | MPSRRRRSNN LFFEAYCVFL RYPRTIAVIF SLLNPSTSFQ LRSDQRIRLP AMGLAASTPK
QEKRSEPEQA PETKQIKRRH KTEEWKIAVD TFAKQVLDPS YLHLPVRAST MEAASFYPSE
NNEQACLMPG THKHLGGAYD ATDGCIYGIP ASAKAVMCLY PDGDKYKMTT IPLPEDAAKT
TYKWLRGIFA DGYLWAIPAW ADSVLCVDVD AFWGRRPASG EVVQLIPLPD EHPKDMRWQW
HGAGMNREKT AIYCIPSNAQ RVLRVDLRMK TTSLIPIEYN PDKYPNFRIE LANKWYGGIL
GEDNAVYGVC YRSCAVLRID CESDTASLVG PDYGCAGYNW HGGVKTNGKI YAHPSHAPDS
VLVINTNPDD HKEDPCSELP IKRAEYDKDI RINYKWLGGA IGADGNIYCP ACDTSSVLKI
DTQTEECTTF GFVGTLKNKW QGGILGRDDC IYCIPASGHH VLRIFTSPDI VGENPIQLIG
QMPVHKDKWQ GGHVGKDGAL YFIPENGYRV LKVTPPNAPP SLVNGKLPEG DVKIEMM
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