Gene PHATRDRAFT_49419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_49419 
Symbol 
ID7195910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011690 
Strand
Start bp206820 
End bp207938 
Gene Length1119 bp 
Protein Length343 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184204 
Protein GI219127984 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAGCCTCGTC ACTCTCCGTT CCGGTGAAGT CCACTGTGGC GAACGCACCA ATCGGTACAA 
TTTCTCGTTT TTATATCTTT CGAAGTCATG GGACGTAAGA GGAAACGGCA CAATCAGAAC
CAAGGTCACA AAAAGCGGCA TGAAAAGGAG AAGTATTGGA TCAATGATTG CAAGTCTTCG
AAAGATGGAA ACTACGATTT CTGTCTCTGG ATTACCCGCT CTTACCTTTC TGACAATTAT
CAGCAGCTGC ATGCTTCTGA CTCTTTGACG GAATGCGAGA GTGATGCTCA CATCCTTTCC
GAGAAAGATT TGGCTCACCG GATTTCAACG CCAACGCAAA ATGCCTATAT TGTCGATCAG
AGAGCAGGCG TTCCATTTAA CTCACAAGCC GACACAACCT CTAAAGTCAC GGTGCTTTCC
GCTCCTAGAA TAGAGGAGCG ATCACTGAAA CCATCAATCC GTATTCGAAG AACCGGCTCG
GCCGATAAGC CACTAGACGT GTCCAGTAAC GAGCACTTTT CTCTGCTAGC CAACGGCGAC
TGCGGAGATG GCATCTGCAA CCCGTATAGG CAAACGGAGG TCGCTGATAA ATACTGGGCC
CAACGGAAGC GACTCTTCAC AAAGTTTGAT AAAGGCTGCA AACTTGATAG GGACGGTTGG
TTCTCGGTCA CTCCCGAAAT AATTGCGAAT CATATTGCAC AGAAAATGTT TCACGGACAT
CACGACGACA AAGCAATTGT GCTAGACGCC TTTGCCGGCG TAGGTGGAAA TTCCATTGCA
TTTGCTCTAC GACCAGAAGT ATCATTAGTG ATTTGCGTCG ATATTGATGA ATCGCGGCTT
TGCTTTGCTG CAAACAACTG CCTCGTCTAC GACATACCGA GAGAAAAGAT TGTTTTCATT
TTGGCGGATG CCATGGACGT CTTGGCGAGA TACAAGAGCG GGGCACTAGC TAGCTGTCTT
CAACATCTGT CGACGAAAGA AAGTCCAGTC CACGGAAAAA GATTTTCTGC CGACTATCAC
GGCTACCGAT ACGGAGGTGT CGAGCTTCTT CCAGAAAAGC TCGACGCCAT TTTTCTTTCA
CCTCCTTGGG GATCCCCGGA ATGGACTATG GAAAGTTAG
 
Protein sequence
MGRKRKRHNQ NQGHKKRHEK EKYWINDCKS SKDGNYDFCL WITRSYLSDN YQQLHASDSL 
TECESDAHIL SEKDLAHRIS TPTQNAYIVD QRAGVPFNSQ ADTTSKVTVL SAPRIEERSL
KPSIRIRRTG SADKPLDVSS NEHFSLLANG DCGDGICNPY RQTEVADKYW AQRKRLFTKF
DKGCKLDRDG WFSVTPEIIA NHIAQKMFHG HHDDKAIVLD AFAGVGGNSI AFALRPEVSL
VICVDIDESR LCFAANNCLV YDIPREKIVF ILADAMDVLA RYKSGALASC LQHLSTKESP
VHGKRFSADY HGYRYGGVEL LPEKLDAIFL SPPWGSPEWT MES