Gene PHATRDRAFT_49410 details

Gene Information

• Locus tag: PHATRDRAFT_49410
• ID: 7195904
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011690
• Strand: -
• Start bp: 182862
• End bp: 184838
• Gene Length: 1977 bp
• Protein Length: 658 aa
• GC content: 45%
• Product: predicted protein
• Protein accession: XP_002184200
• Protein GI: 219127975

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGCAAAC AAAGGAATCG CAAAGCAAAG CCTCTCAAAT CAATACTACC TGATTGTCTC 
GATCCGATTG ACGAATCAAT TGAGGGATCA GAGTCATCGT CCATTCATTC GGAGAATTCG 
GAACCTGGAG TAGACTATTT AAAACCAGGA AAGGAGACGG CTCAACATAC GCAAAAAGAT 
AGCAACCAGC CAGAGATCAC TAAACAGTTG GACGAAGAAA AACAGAAGTA TTGTGATAAT 
CCTAGCTTTC GTTCTGCAGG CATTGTGTCA GGCGAACTCA TAAAACAAGA ACTTTTAGTA 
GCACCTTTCT TTCTACAGGG GACTCCTTCA CGATTCGAAG AGAATTTACA CTCAACGGAA 
GAATCAGGTT CTGTTACTCC AAGTATTCCG AACATCAGGA ACGAGCCTGT AAACAGCGAT 
ATCACGAAAC ATACTGTTCT CGCAAGTATG ATCACTCCGA CGGAAAACGT CTCGAACAAA 
TCTATTTTAG CGGTTGTCCG CGACGACTCC TCAGCCCCTT TGTTCAACTA TGACGACGAC 
TTCGACACCG ACGCTGTCGA CCCCGAAACG GAAGAAGAGC AGTTGACCTG GCGGATGGAC 
CCGTCCAAGA GCTTGAGTGA CTGGAAAATC AAGGTAACCA ACAAGGAGAC ACGGCAGAAC 
GAATTATATC ACGTTCACAA AAATTTACTT GCTGTTGGGC CCAAAAAATC TGAGTACTTC 
GTCCGTATTT TTCGAACCAA TAATCGTCTT GATGTGGGAA CCAGTACCAC CGACATCTTT 
ATGGAGAGCG TGGCTGCCCA CGTGATTCCA CAATGGCTGG ACTTTCTCTA TTCGCCCGAC 
GATGAGCTGG TCATTGACAC ACAAAGTGCA ACTGGCCTCC GTCATCTGGC TCAGTTCTTC 
GGAATGCGTT CCATGCACAA GAAGGCCATG GAGTTCATCG TACAAGATTT GTCCATGACA 
AACGTGATTG TCTACTACAA GGATAGTGTT GTACTAGCGG ATGACAAGAT TTCCGAGCTT 
GCTGCCAACC ATTGTAGCAA CAACATACTA TCAATTGATA GCAAGCACGA GCTACTCACG 
ACGGTCGACC CTTTCTTCTT CCGAAGATTG ATGACAGGTC CAGAGATAGA CAGTAGAAAG 
AAGCAATATC ATATCAGTTC TCTCCTGGCT GAGTACTGCG CACTGAATTC GAACGTACTT 
GATGAACAGT CATTTGAACG ATTGACGGAT GAGAAATATT TGCCACTCGT GGACCGAAAT 
GCTGCGTTGA CTTTATTGGA ATTGGAGGCT GATCTTGTGT TAATCAATTC TTCTGAAGAA 
GAGAAAAGCG AGTTGACGAG TTTACAATTA AGGTGCATCA AGGACTTGAC GCTGTATTGG 
CAAGAGCTAG AGGTTATGGA ACATGATAGG ATTATGCGTG TTTGTCGCAA ATTACCATCC 
ACAGTTGTTG CTGACCTTTT GGTCAAATCG CTAACCCAGG CCAAAAAGAA AGTTGATGAG 
GTTGAAGCTC AGTCTGCAGC TCAGACAGCA GCGGTAAAGC TAACGCGATC AGGATCGGCG 
AAATCTCTTG CCTCAGAAGA AAACAGCAAA ACGGATTATA GAGACATGTC TTCAAAATCA 
GACAATGGAA AAATGAAGGA AGTTCGTAAA GAGTACGACG CCAAGATGTC GAGTCTGAAA 
CGAGAACATC AAAAATCAAT CGACAAGATC CAGCGAGACT TTGAAAGCAA GCTTTTGAAG 
CTCCGAGATA TTTGTGTTGA AAAAGATAAA CACATCGCAA ACTACTGGGA CGAGCTAAAG 
CGTTTTCAGC GTTTGCCAAA CCAGCCTGAA GGAAAGATCA TTCCGTCTGG TCTAATGGCA 
AAAGCGACCA AGATGCCGGA AATTGGGAAT CAGCCACCAG ATGGATATTT GCTCGTCGGA 
AAGGGCAAAA CTCCATCAAA ATACCCTGTA TTCTTCTACA ACGGCGATCA AGTCTAA 

 

Protein sequence

MGKQRNRKAK PLKSILPDCL DPIDESIEGS ESSSIHSENS EPGVDYLKPG KETAQHTQKD 
SNQPEITKQL DEEKQKYCDN PSFRSAGIVS GELIKQELLV APFFLQGTPS RFEENLHSTE 
ESGSVTPSIP NIRNEPVNSD ITKHTVLASM ITPTENVSNK SILAVVRDDS SAPLFNYDDD 
FDTDAVDPET EEEQLTWRMD PSKSLSDWKI KVTNKETRQN ELYHVHKNLL AVGPKKSEYF 
VRIFRTNNRL DVGTSTTDIF MESVAAHVIP QWLDFLYSPD DELVIDTQSA TGLRHLAQFF 
GMRSMHKKAM EFIVQDLSMT NVIVYYKDSV VLADDKISEL AANHCSNNIL SIDSKHELLT 
TVDPFFFRRL MTGPEIDSRK KQYHISSLLA EYCALNSNVL DEQSFERLTD EKYLPLVDRN 
AALTLLELEA DLVLINSSEE EKSELTSLQL RCIKDLTLYW QELEVMEHDR IMRVCRKLPS 
TVVADLLVKS LTQAKKKVDE VEAQSAAQTA AVKLTRSGSA KSLASEENSK TDYRDMSSKS 
DNGKMKEVRK EYDAKMSSLK REHQKSIDKI QRDFESKLLK LRDICVEKDK HIANYWDELK 
RFQRLPNQPE GKIIPSGLMA KATKMPEIGN QPPDGYLLVG KGKTPSKYPV FFYNGDQV