Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_49379 |
Symbol | |
ID | 7195771 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011690 |
Strand | - |
Start bp | 90319 |
End bp | 94594 |
Gene Length | 4276 bp |
Protein Length | 1364 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184181 |
Protein GI | 219127936 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | AACAATCGGA GCCTCTACGA GGCTTTCCCC CCAACTTCTA CTCTTTCGTC GTATTCTACA AATACACTCG TAAGCAGGTA GAATCTTATC AGTTTACTCA GACCCAACCC AGCTCTAATT TTTGAGTTTT GAAACCTCGA CAACGAATGC GTCGTCCGAG GAAGGTCACT CCCGCTGTTC CGGCCCCTGC CGCAGCGACG GACTCACCGG CTGATGCCGC GTCCGCATCC GAAGAGGATG AGGAGTTCGG AGGATTCGAC TCCTCCGACG GTGAGGAGCC TTCGGGCACC GCACCGCCAT CGCCAGCATC TTCGGATGAT GAAGGTGATG GCAAAAAGAC TGCAAAGCCT TTGGCTCGCA GCAAGAACAC GTCTGACGAA GTCAGCGTGA TTGAGAAAAG CGTCATCGAC GCAGAGCCTC ACTTGTCTAA AGACAGTGAC GGTCTCGACT CCGTTCCTCG GCAAGATCGT GTTGAACGAA AGGCCTTGAT GGTCGTCCTC CGTGACGTCA TCTGTGTTCC ATTGTCAGTT GCGGCTGCAA TGTTGAACAA CGGCATTAAA TCATCTGATG ATTTCCGTCT TCTCACGAAG GAGGACATCA ATGATCTCTG CATGCGGCTC AAAATGGGCT CCATGCATAC CAAGCGAATA CTCGTCTTCG CAAAATGGAT GCATCATGCA CCCAACTCAG TCGATGTCGC CAAAGAGTTC ACGGCTTCCG TGCTACGCTT TGAGATGATG ACTAGAGCCG CGGCGTCGTA TGATAACGTG ACTACGACGG CTGCAAAGGC TGAAAAATCG GCTACTAGCC TCTTGCCTGA ACCGTTTGAT GGTTCGCAGA AAAAGTGGCT CACTTTTCGT TACGGTTTCG AAGCGTGGGC AGGCGCAAGT GGGTCCACTT TTACCGCGTG CATCGCGCAC CATTCGGATC GGTATTCGAA AGCCGACCCA ACCGGACCCC ATACGTCGCC CCGTGACGTT TCAGATTTGT TTGCACTCTC CCCAGTTGTC AACATCACCA GGAACGCAAC AATCTTCTAT ACTCTCATGT CGCTAACCAG CGCTGGGGAC GCCTGGGGAC TTGTTGAGCC CCACGAGCAC ACTAAGGACG GACGCAGTGC CTGGATTTCT CTATGTGCCT TCTATGAAGG AACGAGCCAA GTGGGTCTCA CTACCGAGCA GGCTCGCGCG ACAGTTATGG AGTCGGTGTA TACAGGACTG TCCAAACAGT TTTCCTTCAC CAAATATGTC GCTCGGCATA TTACTGCCAA CAATGCCCTT TTGCGTAACA AGGAGGGCTA TTCGGACGCT CAGAAAACGA ATTTCTTTCT TAAAGGGATT ACTGATCCGG CACTCCTTCC TTATAAGGCA ACTGCCGAAG CGCGACTCGA TGACTGGAAT TTTAATCGGG TCGTCAACTA CATGCGTACG TCCGCGACGA AACTCAGTTC CAAGGACAGA AGCGACTCAC GGAACGTACG TCAGACAAAG ACCACTGGCA GAGCCACCGG CAACCAACGT GGTAACGACA ACAAACGGCG TGGCTCGTCC AACCGTCCGT CGAACAAGGG GGCTGAGAAA CCTTCCCGCC CTCATAAACA CGTCTTACCT CCTGAGCTGT GGGAAGCCCT AACCCCAGCT ATCAGGGAGA GTATCTTGAG CGCAAAACGC AGTATTGCAC CCCCTGGCCG TGAGGCCAAA AGGGCTAAAT CCTCAGATAC AGATAACTCT AGTTCAACCG TTGAATCTTA TTCACAACTG CCTAGTAGTA AAAAAACTAT TCGTAAACAT ACATGCGAAA ATCACGTCCA AGTAGATCCC AGTACCCCTG AAACCCTACT TCGTGACGCA CCCACAGACA TTTCACCCCA CGTCACCGCA AAAAAAGTGA CATTTGGTGC AGGTGTCCTC TTTGGTCGGT ACGCTAATCG CGTATCGTTG AATCGTATGG TCCGCTCCGG CAGTCATTTC GATCAAGCCC CTTGGCGCAA GTCGGATTTC CGACTTAACG ATGCGACACT AGTTCGTATT CGTCAGAACC GCTCACGCGG AACAAAAACT CCCACCAATT ATGGTGAAGC GGTAATTGAT ACTGGTGCAG ACACCGTCTG CGTCGGTGCC GGGTACTCTG TATTGTCATA CACGGGTCGA TCAGTCAGCC TTCGCGGTTT TCATGATGAC GGTGAAACGT TTGAACGGAT TCCGGTTGTC ACGGCGGCAA CCGCCTATGA TTATGACGAC GGAACAACCG TGATTCTCAT CTTTCATGAG GCACTGAACC TCGGGCCCAC ACAGACCACC TCGCTCATTA ATTTGAATCA AATCCGACAT GCCGGACATC AAACCGATGA CATTCCAAAA TTTTTGTCGC AAGGCAAATC CCTTCACGGC ATCGAAACTC TCGACGGTGA TTATATCCCG TTTGAGCTCA AAGGTCGTGC ATCTCTGTTG TATTCTCGCG TCCCTACTCA ACATGAGCTT GACAACTGTC AGCACATTGA TCTCACTTGC GATCAACCAT GGGACCCCAA CAGTAAAGAT TGGGAAGAAA ATGAAGCAAA GTACACGCGA CACGATCGTT CTCGTCGTGC CTGCTACACC GACAGCGTAC AGGTTGACAT TCTCCCTGAT TGGCCTCCAC TACCCGTTTC TCCTGGATCC GTTGTACCGG ATTTCCATAA CCGTGTCATG AACCCTCGCG ACGTCGTTCG CGATATCAAA TACGCCACTA TCGGTGCGTC CATATCCAGC CCTCGGGTGA TGGACGTCGA CCGCGATACA TTACGGCGAA TTCTCGGACA TGTGCCGATG GAAGTAGTTG AGCGTACTCT TACCGCCACT ACACAACTAG CGGAGCGCAC GGGCGAAATG CCTTTGCATC GTCGTTATAA AACCAAGTTT GAACAACTTC GGTATCGACG TTTGAAATGC ACACTTTATA GTGATACTTT TAAATCCTCT ATAAAATCCT CGCGTGGACA TACCCATACT CAGGGTTTTG TCTGTGGTGA CTCTTACTTT ATCTATCATT ACCTAATGAA AGCAGAGTCC GCGGCAGACC AGGGTCTCGC CGAATTCATC CACAACATCG GTATTCCTGC ACAATTGCAC ACCGATAACG CGAAAGTGGA AACACTTAGC AAATGGAAAA AATTAACTTC CAGTCACTGG ATAAAGACGA CGGTCACTGA ACCCTACTCT CCGTGGCAAA ATCGCTGCGA ACACGAATTT GGTGCTGCGC GCATTCACAC GCGCCTCGTT CTCGAAACCA CCAAGTGTCC CGAACAATTA TGGGACTACG CCCTTGCCTA CGTCATTTTC GTACGTAACC ACACGGCACG AAAAGCGCTG GCCTGGATCA CGCCTCTTAC TGCGATGACT GGCGACACCC ATGATATTTC TGAAATCCTG GTTTTCGAAT TTTTCGAACC AGTTCAGTAT TTTGACAATC CCGATGTCAA ATTTCCACAA AATAAAGCCA AAGTCGGCCG TTGGTTAGGT ATTGCCACCA ATGTGGGCCA AGCCTTGTGC TACCATATTT TGACAGCCAA GGGTACTGTA ATCACTCGAT CTACCGTTAC ACCTCTCCAA AACCTCGATT CGTCTGCTCT GCAGACTGCC CTCGCTACTT TTGACGCCAC CATAAGGGAG ATTTATCAGC CTTCTGATTT CGCCCTCGGT AACAAAATCA AAGCGCCGGC TTTCCGCCGT GACGAAGCGA TGAAAGTCGC TCGGCGATCC GACGATCCCG GCGATGGCAA CACCCGTAAC AGACACGTGT TATACGATCT GAACGAAGGG GACGACCATA TTCAACTGGA TCCCGGGCTC ACGGTTGACG ATTTCTTCGA GAACGACTCA CCGGATCAGG ACCCCACCTC CTTAATTATT GGTACTGACG TTCTACTCAC TTCGGGTGCG GTTCAGCGCC AGGGCCGAGT TACCAAGCGC GATCGCGACG GTACTCCAGT CCCTAACGAC GACCCTGGAA ATTTCGTCGT CGAATTCGAC GACGGTACCG AGGAAGTCCA CGGTTACCAA GCTCTCCTTG ATGCTGTTTA TAAGCAGATC GATGATGACG GAAATGAATG GTACACTTTT GATGATATTG TCGATCATCA AAAACGCCCC CGCGGTGGTC GGGGACGTAC GCGTGGATGG TTTCTACGCG TAAAATGGGC CAACGGTGAA TTTACCTGGG AGCCCCTCAC CTCTTTGAAG GAGAGCAATC CCTACCCGGT GGCCAAATAT GCGGCCGACC ACGATCTCCT ATCTGA
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Protein sequence | MRRPRKVTPA VPAPAAATDS PADAASASEE DEEFGGFDSS DGEEPSGTAP PSPASSDDEG DGKKTAKPLA RSKNTSDEVS VIEKSVIDAE PHLSKDSDGL DSVPRQDRVE RKALMVVLRD VICVPLSVAA AMLNNGIKSS DDFRLLTKED INDLCMRLKM GSMHTKRILV FAKWMHHAPN SVDVAKEFTA SVLRFEMMTR AAASYDNVTT TAAKAEKSAT SLLPEPFDGS QKKWLTFRYG FEAWAGASGS TFTACIAHHS DRYSKADPTG PHTSPRDVSD LFALSPVVNI TRNATIFYTL MSLTSAGDAW GLVEPHEHTK DGRSAWISLC AFYEGTSQVG LTTEQARATV MESVYTGLSK QFSFTKYVAR HITANNALLR NKEGYSDAQK TNFFLKGITD PALLPYKATA EARLDDWNFN RVVNYMRTSA TKLSSKDRSD SRNVRQTKTT GRATGNQRGN DNKRRGSSNR PSNKGAEKPS RPHKHVLPPE LWEALTPAIR ESILSAKRSI APPGREAKRA KSSDTDNSSS TVESYSQLPS SKKTIRKHTC ENHVQVDPST PETLLRDAPT DISPHVTAKK VTFGAGVLFG RYANRVSLNR MVRSGSHFDQ APWRKSDFRL NDATLVRIRQ NRSRGTKTPT NYGEAVIDTG ADTVCVGAGY SVLSYTGRSV SLRGFHDDGE TFERIPVVTA ATAYDYDDGT TVILIFHEAL NLGPTQTTSL INLNQIRHAG HQTDDIPKFL SQGKSLHGIE TLDGDYIPFE LKGRASLLYS RVPTQHELDN CQHIDLTCDQ PWDPNSKDWE ENEAKYTRHD RSRRACYTDS VQVDILPDWP PLPVSPGSVV PDFHNRVMNP RDVVRDIKYA TIGASISSPR VMDVDRDTLR RILGHVPMEV VERTLTATTQ LAERTGEMPL HRRYKTKFEQ LRYRRLKCTL YSDTFKSSIK SSRGHTHTQG FVCGDSYFIY HYLMKAESAA DQGLAEFIHN IGIPAQLHTD NAKVETLSKW KKLTSSHWIK TTVTEPYSPW QNRCEHEFGA ARIHTRLVLE TTKCPEQLWD YALAYVIFVR NHTARKALAW ITPLTAMTGD THDISEILVF EFFEPVQYFD NPDVKFPQNK AKVGRWLGIA TNVGQALCYH ILTAKGTVIT RSTVTPLQNL DSSALQTALA TFDATIREIY QPSDFALGNK IKAPAFRRDE AMKVARRSDD PGDGNTRNRH VLYDLNEGDD HIQLDPGLTV DDFFENDSPD QDPTSLIIGT DVLLTSGAVQ RQGRVTKRDR DGTPVPNDDP GNFVVEFDDG TEEVHGYQAL LDAVYKQIDD DGNEWYTFDD IVDHQKRPRG GRGRTRGWFL RVKWANGEQS LPGGQICGRP RSPI
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