| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49357 |
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| Symbol | |
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| ID | 7195877 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011690 |
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| Strand | + |
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| Start bp | 24338 |
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| End bp | 27060 |
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| Gene Length | 2723 bp |
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| Protein Length | 841 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002184050 |
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| Protein GI | 219127662 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0047033 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | AGAATACTTT GGGGAATTAC CTGCAAGCCA ACTATCATAC ATTGCAGGCC AAAGGAGCTT
ACTGCATCAT GAAGTGGACG AATGTCCATA TTTGGCTCGG TGTAGGGACG CTACTCGCGG
GACGGGAATC CAGCACCGTA CACGCCGAGT CGCACGAGCA CCGTTCCCGG AAGCTCGCAG
TAGCCGTTGC GTCTCGGTAA GTCCCGAAGC ATTGCGTGTA CGATCAGGTT ATGTACCGGA
ATGAATTTAC ACTCACCAGA AATGGCGCTT GTGTCCAAAT CGGGTGGGTC TTCTTTCTAT
AACAGTGTCT TGCAGAAGTC AGTGAACGAC TTTGTGACGA ATTCAATTGC GCGACCGCAG
CAGTTGAACT TGCCGCCCCA GATGCAGCAG CAATCGCCGT TGCATCTCCA CAGAACTTTA
GAAGATGGAT CCAATGTAGA ATGCGATGCT GCCTTTATGG AGTGTATTCT CAACGACAAG
TGCGTAGAGT GCTTTCTGAA AATGCAAACG GAAGGGATCG ATTGGGCGTT CGTCACCAAA
GAAACGCCGT GCGATTCGGT CTTGGAGACG CTCTACGACA AAACGTTTTG TCTCAATCAG
CGTGGTGATG AAGCCGCTGA GGGAATCTTT TGTAGTACGT TTGCTGCTTG TGTGGATACA
ACACAGGAAG TCCCAGAAGA GGACGACAAA ACGATTGATT GCAGCAAGCT TACTAAATGT
GATTGGCCCG GAATCCATCT TAGCTTTTTG GGGGATGGTG TGTGTCACGA GAATCTGGAG
GGTTGCTACA ATACAGCCGT TTGTAATTAC GATGGGGGCG ACTGCTGCGA CGACACTTGT
TCGACCGACA GCGACTACAA AAAATGTGGA CAAGATGGGT TTTCGTGCAA GGACCCTAGT
AGTGCCAAAT GTGACTCCTC TCTTACCACG GGCTGTCCGA TAAGCGACGA CGACGATGGC
GCGTTCCCTT TACCACCCCA GTGCTCTGAT TCCCAAGCGA TTTATCGTTT GGTCATGTAC
GATTCCTTTG GCGATGGCTG GGACGAGACA GTTCTCACAA TTCGGGATGC TGATACCAGA
CGTAGTGTTT ACACCGGATC TTTGCAGGAA GGGTCACAGG GGACTCAACT TATCTGCCTC
AGTCGCTATG CCCAGTGCTA TCACGTCGAT GTCAACGGTG GCACCTGGGG CAACGAAGTC
TCGTGGGAAG TCAAGCCCTA CACAGATGGT ACTCCGGCCT TGGCTGGTGG AAGCTCGCCT
ATGAGTTGCG ACTTTTCCGT CTCTGGAGGC AAATGTGAAA AAACATGCAC CGGACGACCC
AATATTCGTC CCGCAGACGA TCCAGAGTAC AAAGAATTCA AGGAAATGTA TACTTGCATC
AACGAAAAGT GTCCGATTCA GGTAGGGGCA TGTCAGAAGG ACGAAGCTTG CAGCAACTGT
TTTGTGGAAG AGGCTCCCGA TTACTGTTTT GGCATTGACA CATTTAATGC GGTAGTCGAT
TGTACCTTGT GCAAGTGTAG TGGAGTCAAA GATAGTGATT TCTGCGACAA GAAAGCGTCC
CCAGGTATAA TCATCCCGGA TGCAGACGCC AAGCCCGGTG GAGATTCTGT CAAGAAACCC
TGCACACCAG CTGAGACACT CAAAGGTGGG CAATCTGTAA TAAAGTTTAG CCAGTGCACT
GATTTGGATC AAGTTGGTAT GATGGTAACC GATTTCGATC AAAGCAACTT TGGGGATTTG
GATGTGTTCG AAATGTGCGC ACATTCGTTC AACAAGGATG TCAACCATGG TGGACGCACG
GCACAAGGAT GTATGCAAAT TCTTGCCAAC ACCATGAATA CTGCCGCGAG AGACTCGAAT
TCCTCGGAGG ATCAACGCAC TACAGCAATT GCTGCCTTGG CCAAATTCCT GTACACAGAC
GCGAAGAGTT TTTGCGATTG CGCAAAAGAT GCTTCTGATA ATTGCCCTCT CTGTCCTTCA
TTCGCCAATT TCAAGACTCT CTTATACGAG TCACTAGATG CATGTCAATC TTTGGACGAG
ATCGACTGCG ACGCTTGGGA CGAGTTTCAA AAACCGTGTA AGCAGAATCT ACAGTCCACG
TTTGGAACGA TCGATTTCAC GAAGGAGGAA CAGTGTGATT TTGTCCATGA TAATAGCTGC
GGTGGCGCTG GTCCATTTCC AGCCTTTCGT CGACTTGATT GCGGAGACGA GCTGGAATCT
ACTGTTTGGA ACTTCTACCT TGACTTTGCC AAAGGCTGTT TAAGCGATGC CCCGCCGACC
CCTGTAAGCC CAACTCCGTC ACCAGTGACT CCGCGGACCG CCGTCCCCGT TGCACCAGCT
CCAACGCCGG TCAATCCTTC ACCCTACGAT CCATCTCCTG CGCAGCCGTC GGACAACAAA
AAGCCATATG TGCCTCCAGA GGAACGTGAC AAGAAAAAGT CGAAAGACGC CAAACCCGAC
GACACGAGCA GTAAGAAGAA ATCGCACTGG TTCCGAAATC TTTTCATTCT TTGTTTGCTC
TGTGGAGGAG GTTATTACTA CTACAAACGC CGATCAGAGT TTAGCTTCGT TCGCTACCGC
CGGGCTCGGA ACTTTGGCGG CGACGAAGAT GGCGTGTACA GCGGTCTCAC AATGGAAAGC
TCCACATCAT TCGAGCCGCC GTCATTGCCA CCAACTCCTG CTGCCATGGG CAACTACACA
TAACTAAAAA ACATTGCATA TCC
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| Protein sequence | MKWTNVHIWL GVGTLLAGRE SSTVHAESHE HRSRKLAVAV ASRVLQKSVN DFVTNSIARP
QQLNLPPQMQ QQSPLHLHRT LEDGSNVECD AAFMECILND KCVECFLKMQ TEGIDWAFVT
KETPCDSVLE TLYDKTFCLN QRGDEAAEGI FCSTFAACVD TTQEVPEEDD KTIDCSKLTK
CDWPGIHLSF LGDGVCHENL EGCYNTAVCN YDGGDCCDDT CSTDSDYKKC GQDGFSCKDP
SSAKCDSSLT TGCPISDDDD GAFPLPPQCS DSQAIYRLVM YDSFGDGWDE TVLTIRDADT
RRSVYTGSLQ EGSQGTQLIC LSRYAQCYHV DVNGGTWGNE VSWEVKPYTD GTPALAGGSS
PMSCDFSVSG GKCEKTCTGR PNIRPADDPE YKEFKEMYTC INEKCPIQVG ACQKDEACSN
CFVEEAPDYC FGIDTFNAVV DCTLCKCSGV KDSDFCDKKA SPGIIIPDAD AKPGGDSVKK
PCTPAETLKG GQSVIKFSQC TDLDQVGMMV TDFDQSNFGD LDVFEMCAHS FNKDVNHGGR
TAQGCMQILA NTMNTAARDS NSSEDQRTTA IAALAKFLYT DAKSFCDCAK DASDNCPLCP
SFANFKTLLY ESLDACQSLD EIDCDAWDEF QKPCKQNLQS TFGTIDFTKE EQCDFVHDNS
CGGAGPFPAF RRLDCGDELE STVWNFYLDF AKGCLSDAPP TPVSPTPSPV TPRTAVPVAP
APTPVNPSPY DPSPAQPSDN KKPYVPPEER DKKKSKDAKP DDTSSKKKSH WFRNLFILCL
LCGGGYYYYK RRSEFSFVRY RRARNFGGDE DGVYSGLTME SSTSFEPPSL PPTPAAMGNY
T
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