| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49353 |
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| Symbol | |
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| ID | 7195758 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011690 |
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| Strand | + |
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| Start bp | 11090 |
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| End bp | 12708 |
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| Gene Length | 1619 bp |
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| Protein Length | 470 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002184045 |
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| Protein GI | 219127652 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00242738 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTTTTCAAGG ACAAGATCGT CAGATGCAAC GCCAGACTTT GCCACAACGT CAAATGAGGT
GACTTACGCA GACTGAGAGT AAACTCCTAA AGCTGGTAGA ATGCGGCGAG ATGCTAAAGC
TGTTTATCGC AGACCAGCAT CCAAATCTTG GCATGAAATC CTTGTGCTCC TGACAGCGAC
GAGTACATTT GTTTGTGCCT TAGTCAATCT AAGCCACCAG TCCTCATATG CTTCTCAACC
CTCACATCGT ACCAGTGTTT GTCAATTGGA ATCTGGATAC GATTTCCGCA GCTTACCACG
CGTGAGGCGA GGACCACTAG TGCAAATGCC TGGAATGTAC AGCTCAAGGA GTGAAAGTAC
CGCAACTGGA CTTACGGGAC CGTTGAAATC CAACGAAACC GAAAATCCTG TCCTCTACAG
CGAGACATTT CAAATCCTTT CGGTGGATCT GCCCGAGATA AGCCCATACT ATCGCCACGA
CCGACGAGAT AAACTAGGGG CACCAATCAA TGATACCGCT TCCAAAGATC TGAGTCGTCT
GCTCGAACAA CGTTTTCAAG CACGGAAAGC CCGTAACTTT GAGCAGCTAA ACCAAGTCGA
AGCCGGGACA ACTACGACGT GCGAGTATAC GATCATCCCC CAATCTGGAC AAGGCTAAAG
GAACCTCCTA GAGCCCATTT ACGGAGACAG GCGCGCAAAT GGCTCTGGAA GGCCGAAACC
TTGTACGGAC CCCGGGGGCA TCCCTTGGTT CAGGTAGGTA ATTTGATGGA TACAGACTCG
TTCGTATGCC CTTTGACGAT TTCGCAAATA CATTCGTCAT TGATGCAACG GGAGCTTGGG
CGAATGCAGG GGCAATTCGA TCAAGTGAAT GCAATTCGGT TGGAGTTATT AGTCTACGGT
GTTCGTGTTC ACGACGACTT TCGCCAGTGG ACGACTGACC CAAATCACGT CTTTCTTGCG
AATACTGCTT CGAAACATTC CCCTGCATTT CCACATGCAT ATCAATGCGA TCCGTCTTCG
CAATCGTCGA CATCTCTAAC TATAGATGGG AGCGAAGCAG ACCGTCTGAC GCAACGAATC
GAGTTCCTGG TACGCACGAG GGCCGCGGCA CTCTTCCGTG GCGACGACAA AAAAGCTCTG
TTCATAGCTT GCAAGCTCTA CATGACTTAC GGAGTTGGAG TCAACGATAC AACGAGGACA
TGGTCAATTG GGTCTCGGTT CCTGAAAAGT TACGAAAATG AATGGAAGGC TCCGACCATT
TCAAAAATCT CTGAAATGAA GGAAAAAGTG TCGTTTACGC ATGAGCTCTT TCAAATGCGT
CGCCATTTTG AGAGCCCAAA CTTCAGACGA AGCCAAAATT CGCATTTTTT TCCAAATGCG
ATTGTAGAAA AGCGAGTGGC TTCGATGGTA CAGGAGCGTA TTCACAACCG AGAAGAGGGT
ATGTTTTTGG AAGCTGATGC CATCCGTCGG GAACTTTGGT CCACTTACGT AAGTGCATTT
TTTTATTTCG GTGCTTTTTG ACAACGCCAA TACTGATTTT CCTTGTTATT CGCCCACAGA
ATGTTGGAGT CAATGATCGG CTACAGCAGT ACAGCCTGGG AGGAGTATTT GAAATTTAA
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| Protein sequence | MRRDAKAVYR RPASKSWHEI LVLLTATSTF VCALVNLSHQ SSYASQPSHR TSVCQLESGY
DFRSLPRVRR GPLVQMPGMY SSRSESTATG LTGPLKSNET ENPVLYSETF QILSVDLPEI
SPYYRHDRRD KLGAPINDTA SKDLSRLLEQ PKPSRSRDNY DVRVYDHPPI WTRLKEPPRA
HLRRQARKWL WKAETLYGPR GHPLVQVGNL MDTDSFVCPL TISQIHSSLM QRELGRMQGQ
FDQVNAIRLE LLVYGVRVHD DFRQWTTDPN HVFLANTASK HSPAFPHAYQ CDPSSQSSTS
LTIDGSEADR LTQRIEFLVR TRAAALFRGD DKKALFIACK LYMTYGVGVN DTTRTWSIGS
RFLKSYENEW KAPTISKISE MKEKVSFTHE LFQMRRHFES PNFRRSQNSH FFPNAIVEKR
VASMVQERIH NREEGMFLEA DAIRRELWST YNVGVNDRLQ QYSLGGVFEI
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