Gene PHATRDRAFT_49352 details

Gene Information

• Locus tag: PHATRDRAFT_49352
• ID: 7195872
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011690
• Strand: -
• Start bp: 4287
• End bp: 10556
• Gene Length: 6270 bp
• Protein Length: 1967 aa
• GC content: 47%
• Product: predicted protein
• Protein accession: XP_002184167
• Protein GI: 219127907

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.248427
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTTCGT GGAAGTCGCG CCTGTACGCC TTTTTGCTCA AACGTGTTTT GGGACCTCTT 
CTGGATACAC TTTCTCTGGA TAAATTACAT CAGTCAATCG AAGTGTCCCT CCAAGACGGA 
AGGCTTGTGT TGAAAGATGT AGCCTTCAAT TTGGATTACA TTGAAAAGAT TCTTGTGGAT 
AAGGTAAACT GCACTCTTCG AATCAGAGAA GCTCGTATCG CTCGCTTGCA AATCGCGCTA 
TCACTGGAAG AGCACATACA ACCAGATGAA AGCTACTCGG ACCATCACCA AACGCAACCA 
AGCACGTTTG TCTGGAGAAT CATGGAGTTG ACCTCATCAA CTTCACCAAA AGTATCCCTG 
GTAGCTAATT TGGAGCTGGA TGGGGTTGTA ATAGAGCTAG AGCCGCAACC GGCGGCCCCT 
TTTTCAGCAA GACCTCCCCT GAAGACGCCA ATTGCGTATG AACTTCCTGA GGATGACGCC 
GTACGTTTGA GCTCGACAGC AAGTTCCCAA ATCTCCACCA AGAGTACACT TTCTGTATAC 
ATGGAATCGG TGTATTCCTC GTTGCGTTTG AGTGTTCGGC TGAACGACTT AGAAATAAGT 
TTGTGTAGTG GAATGGAGTC GGGTCGGGAA ATTTGGCTGA GCTTGCATTG CCAGTCTGTA 
TCGTATTATG ACGCAGCGGC CTCGAACAGT GGTGATGCGT CAGACTACAC AATGATACTT 
CACAAAGTGT TAGAGTTCAG TGTTGTCAGT CTCACCGTCG GTGAAACGCC TTGTCAACCG 
AGCTCGGCAG AAAATTCAAA TCATCAAGCG GAGAGAGCCA TGTCAGCAAC GAAAGTTGCA 
CTTTTGGACG GCTCAAGTCA AGTTCGACTA CGAGTTATGG AGTATCAAGT TGCCGATGCG 
AATCTCAATA CAGAAATACA AAAAAATTTA CAACAAGACA TTCAAATAAT GCTGAAGCAA 
CGACTCAATT TACTGGCAAA CAAAGTCTGT CTGGTTCATC TAAGCACTCT GGTTGACGTC 
CTGCGGAGCA ATTCGAACAA GACTTCTTCT ATATCTCGTG AGTCTACCGC TACGGAAACT 
CGCAGTATTG CCAGCGATAG CGAAGCAGAC TTGCAGACAC TGGACGGTAT TATGAAGCAG 
TATAAGGAAG CGAGGTATTT AGCAGATCGT CGAGAGATAC GAGGGGGTAT GCTCCTCCCT 
GACAAGGAGG GAAACGACAT TACCTTTGAC GCCTTTTTCG ACGCGAATGA CAAAAGCTTC 
TATCGATATT CAACTGTCTT GCAGCAATCA ACGATTTATG ATGGCAAGGT ACCTGAAAAT 
GGAAATAATT GTGTACACAC AAAGATTCAT GTTAACCTGG ATGAAGCAGG ACTAAAGATC 
TCCTTCGGAA CTCTATCGTC AAGTCACGTG GTGTCTCGAC CAGCTTTCTT CGAAGAGTAT 
ATCCTTGCTA CTTTTGCCGA TATCAATGTC ACTGCTTCCA TGTCTGCATT AACTTCGGAC 
ATTGGTGTCA GCTTGACGCA CATTGAAGTA GATGATTCAC AAGCCGGCTT TGATCCACTA 
TCTCAGAGTT CTCGCGTGGA AATTGGAAGC GTTTTGCGTT GTTCCTCTGC AGATTTTCAG 
GATACCGATC AGACAGATAT ACTTCTTGGT GCACCGTGCA TTTCACTGAG TATGAAGATT 
GACCGTTCAT CCACACTGCT TGAGGTTGCT GTTGAACCTT TGGAAATCAC TTATCGGCAC 
TCAACGGTTG CGCATCTTGT AACTCTACTA CATAGCTTTT CCAGTGAAGA TGAATTCTCG 
CAACAGCAAA ATGAACAAAA GAACCACATC GATGCAGTGC CGAAGAGCGA AAGCGATCGA 
AGATTTGGTC TTGAGGTTTC TTGTCCAGCG ATAACACTCA TCGTTCCAAT ACTACAGAGA 
GTGAACTTGG ATGCGCTTTT CGTTCGATGT GGGCAAAAAT GTACAAACAA CAAGGATGGT 
AAGCCGTCAT TAAGGGTATT ACTGGACAAC GTATCAATCG AAGCCCGATC AAATTTATTT 
GGAGACGCTA CTCCCGACCT TTCTCTTCTC TGTCACCATG CCATATTCTT TGCATTATCG 
ACTGTCAATG CCAACTCATT TGATGACGAA GTGCGACGAT TGGATCTTGT TGCGCTCGCA 
GGGCGCACCG AGGTCCTCCC GTGTATACCG ATCTCCATTC GAATTTATCT GAAAGTAACT 
TCGTCAGTCT CTGAAAACGA GCCTTCTCTG GCTGAATCGT TGTTCCCTCA AACACCTTCT 
CTTTCTTCGT TCAAAGCCCG ACAAGAGGAC GAGGACGAAG AGCAACATAT TACACAATTG 
CTTTCTTCGA ACTTGAAAGG TGTTAATTTC TTGAATCGCA AAGATCTACG AGGACGAGAT 
CCTCAAATAG AAATGATCGA AAACGCCGTT GAAAGTAGCA GGATTCTGGA GGTATCTCTG 
CCCCAAATTA TTGGCGACCT TACTAGCAGC GAGCTCTATT TTGTGGTGAA AATGCTGGAG 
TTTATCCGAC CAGCGAGAAA GGTCGATACT GTGGACACTC TATTGAAACA GTCTGAATCA 
AACGGTGTTA TTGATACTTC AAACTTGGCG AATGATATCG CAACTCTGGC TCTATCGATA 
GGAAGTTCTT CTTTGGCTAT CCACAATTTT GTGTCGACGG ATTCGACAGC TTCCTTTACG 
TTCTCTTTGC GTTTGTCTCA GACTCAAGTA CATATGCTTC TGCAAGATCG TCAGTTTCAA 
CAAGCTCGCT TTTTAATTCA TGACTTATCT TTTTGTGAAA GTACGTGCTC ATCGTCAAAA 
ATTTGTCATT CACTGTCAGA TCCGTCCAGC TAATCCAATT GCTATCCCTC AGTAGTTCCA 
TCAAAGGTGC CCTCTTTGCA AAAGTATACG TACACAACCG ACGAACGATT GATGGCATTA 
CGCGTTCGAA GCAGCTGCGC TCCACAATCT TTCGCGACAC CCATTTTACA TCGATCTGAA 
CTATTTGTCC CGATATCTCG GTCAAGTCCG GTCATGCTTT TGGATTGGAT GAATCTAAAG 
GGCGCCCGTG GTTCAGGTGG ACTGCCTTAC AGAAGTCTTC ATTTGACTTT TTACGATATG 
ACTTGTAGGT ACGAATACAA CACAATGTGG GTACAACGAC TCTGTTCCTT ATTGGGACAA 
ACGCAAGGAA GAAAAGAAGG CAACCAAGTT GCCGGAGGTG AAAGCGAATC CAACGCTTCC 
GGCGGCGAGT TTCCAGAAAA ACAAAGGCTT ATCCGCCTGT TCATTTCTCT TGCGGACTGC 
AACATCGATT ATAGTTCCCC TGTTCAGTTC GAAACGCCTT CGCGTTTGAT ATGTCGTCTG 
GGGGATGTTC GCATTTCCAG CAACGTCCTG CTTCCTGCGG CACCTGTACA AGCTGTTAAT 
CTGTCCGTGG GAGACGTATC GCTCTATCTT TGCAACCGCC GTTTTCCCTA TGATTTCGAA 
AATAGCAGGA TTGTTGGGGC AGAAGATCTT ATGAAGAACC CACAGACTGT TTCGGCGAAG 
GATAAGCGGG ACTTCATACC GTCATCATCC GAAAGTGTTC TTCAAGCGAT GAATTGCAGA 
ACTTTGGTAA TTCTCGATAC GTTCGATGCA GTATTAAGAC TTGCGCATCA CCGATCGTTG 
ACATCATCGG AGCCTTCCGT CCAAGTCAGC TTTACTGTTG GTGAGCTCGG AGTTTTTGCG 
TGTAAGGACT CCTTTAAGCA TCTTCTTGCT ACTATTGGAG AGCCTTTCCG AGAGCTGACA 
GCACTAAATG ATCGAGCACT GCAAGATTTG AAGGCAAAGG TGGATCCGTT CGTAACAAAG 
ACTCTAGTAG ACGAGGCTTC AAACAAAGAG ATGTCGTATG AATCTTTACA CAGACATACT 
GAAGCCTTGG CAAGTCTGAA GCTACGTAGC GCTTTGCAGC CCATTACAGG GACTGCTGCC 
GTCTTGGACC GCCAAGACGA CTTTTTACTC GATGGATATG ACTGGACAGC CATCGGTCCA 
GATGAACCGG GCTCTGTTGG CGTTATTCCG CCGGGTGACG AGCAATCAGC GCGTTGGTTA 
GGGAAGTCAA GAGAAATCTC ACAGTCTTCG GACGATCAAA ATGATGATGA CCCCCCTCTT 
TCGGGCTCGC CCTCTTCACC TCTTGGCATC GGAAAAGAAC TCAGCCAAGG ACTGACGATT 
ATCACGCATC ACTTCCCTCT CCAACCTCTT TCTGATCCGC TTTCCGCTGG CGACATGGGC 
ATACAGAAAT ACGCCGGGGC GGATGCCTTT CCATTGATCG AGACCCGGTT GGTCTTGCAT 
GATATGAGAG TCAAAGTCCG TTTATTCGAT GGCTTTGATT GGCCTGAACT TATTGACAGG 
GAGAAGCTCC CATTCTGCAA ATCTGGCGAT TTTGTGATCG ATGAACAGAC ACCCTCCACT 
AACAGTAAAA AAGCTAAAAC AAAAGCTACG GCGGCATTCG TTAGCACCTC AAGATCCAAT 
CAACATGAAC ATGAAAAAAA TCGAAAAGCG AAACTTCTTG GTGATTTACT AGACGGAAAT 
GCGATCGATG CCGGTACCTT TAAAAATGTC CCACTTCCAG AAGAGCGCGG TCTGGCGCTG 
AAGGAGCAAT CCGAGCTGCG TTCTCTTTCG CGAAGGACAG GCAAGTATAT TCAGTTCTCG 
GCCTCGGGCA TTCGCTTACG CTTGGATTTG CTCGAGAAGT CAAGCAACCA TCGACTAGTA 
TCTTGCATGA ATATTCGAGC CCATGACTTT TTCCTTGCCG AAACCGTAAG TGGTAGCAAT 
CCGAAGAAGA TGGCTGGCGA GTGGCTCAAC GAAGCGGACC ACCCACGCGA TACGCAGGAA 
GGGCTTTTCA TGATGAAGGT AAGCGTTCGT AATGATACAT GTTTCGACGA CGAGCCCACG 
TCTCACAACA ATCTTTTCAA AGATGGTCAC TTGGCATCCA GAAAGGAGAG TGACGAGCGA 
CGGTGCGATT GCCAGCGACA TTTGCGAAGC TGCCGTCACA ATTCTCCCCT TACGGTGCAA 
CTTGGACCAA CGCGCGATAA GGTTTGCCCG TCAATTCTTT CGGACAGAGT TGAGCGTGGA 
CGACGAGATT CATAGAGACT TGCCATCCGG ATTGCATCAG GTTCCACCAC CGCTTTTTCG 
ATTGTTTCGA GTAAGGCCAT TCAAGGTAAA AGTTGATTAC ACTCCTCAGA AAGTCGATCG 
AAAAGCTCTG AAAGACGGAG CGTTCGTCGA ACTTGTCAAT TTGAGCCCAA TCGATGCACT 
GATATTGACT CTGAAAAAGG TCGAAATAGA AGGAAAGACA GGCTTTGGCG AAGTCCTTCC 
CATCCTGATC CAAAGCTGGA TTCAGGAAAT ATGTAGTACA CAACTCCTCA AGTTTGTCAC 
AAACATGAGA CCCTTGGAAC CCATTACGCA GGTTGGCGAG ACAGCTGTGG ATATGATTGT 
TTTACCTTGG GAAGCCTTTC GGAACGGTGA TAGTGTGCAA AAGGCAATCC GATCGGGAAC 
GACAAGCTTT GCTTCGACGC TAGTGTATGA AGCTTTTACA GCAACATCGC GAGTTGCTGG 
GTACGTAGCG GATCAAGTAG GTCGCCTTGG ACGAGAGGAA TTTGACCGGT CCAACCAGCC 
ATCTCGTCCT CTTGAAGCAC CCCGTCGTGC CACCGATGCG GCGCCACACG CTCTGCAGAG 
TGTCACTCGT GGGTTACAAG AAGCAAACTA CAAGATTGTT ATCATTCCGT ACCGTGAGTA 
CCAGAGAACC GGAGCCCGTG GTGCGATTAG GAGCGTAGTA AAGGGCATTC CGGTGGCGAT 
TGGTGCCCCC ACAAGTGCAG CAGCCGAAGC CATATCCTAC GCCTTGCTCG GAGCTCGCAA 
TCAGATTCGG CCTGATATCC GAAAAGAGGA AGAATCGAGC CAACGTGGTA TGCATCTAGA 
TCGTTAAAAG GTCTCAAAGT CTCCTGTCGC GTCGGTACGA CTTGCTTCGA AACAGGTACT 
GAAGTCGAAG ATGCGGAGCG TGTATACGAA AGCGCTTGTC CCTTCCACCT ACAATCGGAA 
AATGGTGACT CTAGTGACGG GGTAGACGAG GCAGCAAACC CTGCTCTATA ATTCCTTTAA 
GACATACAAA CACGAGCTCG TACGGAAAGG CAGATTGATT TTCCGAATCG ATCGCAGCAT 
GTCGGTAGTA TACCCCCTCA TTTCCCAAGA CCGCGGATCA CGGTGGCAGT ATTTTCTTTA 
AAGTTTTAGC CTGCGTTACG GAATCGACAA 

 

Protein sequence

MISWKSRLYA FLLKRVLGPL LDTLSLDKLH QSIEVSLQDG RLVLKDVAFN LDYIEKILVD 
KVNCTLRIRE ARIARLQIAL SLEEHIQPDE SYSDHHQTQP STFVWRIMEL TSSTSPKVSL 
VANLELDGVV IELEPQPAAP FSARPPLKTP IAYELPEDDA VRLSSTASSQ ISTKSTLSVY 
MESVYSSLRL SVRLNDLEIS LCSGMESGRE IWLSLHCQSV SYYDAAASNS GDASDYTMIL 
HKVLEFSVVS LTVGETPCQP SSAENSNHQA ERAMSATKVA LLDGSSQVRL RVMEYQVADA 
NLNTEIQKNL QQDIQIMLKQ RLNLLANKVC LVHLSTLVDV LRSNSNKTSS ISRESTATET 
RSIASDSEAD LQTLDGIMKQ YKEARYLADR REIRGGMLLP DKEGNDITFD AFFDANDKSF 
YRYSTVLQQS TIYDGKVPEN GNNCVHTKIH VNLDEAGLKI SFGTLSSSHV VSRPAFFEEY 
ILATFADINV TASMSALTSD IGVSLTHIEV DDSQAGFDPL SQSSRVEIGS VLRCSSADFQ 
DTDQTDILLG APCISLSMKI DRSSTLLEVA VEPLEITYRH STVAHLVTLL HSFSSEDEFS 
QQQNEQKNHI DAVPKSESDR RFGLEVSCPA ITLIVPILQR VNLDALFVRC GQKCTNNKDG 
KPSLRVLLDN VSIEARSNLF GDATPDLSLL CHHAIFFALS TVNANSFDDE VRRLDLVALA 
GRTEVLPCIP ISIRIYLKVT SSVSENEPSL AESLFPQTPS LSSFKARQED EDEEQHITQL 
LSSNLKGVNF LNRKDLRGRD PQIEMIENAV ESSRILEVSL PQIIGDLTSS ELYFVVKMLE 
FIRPARKVDT VDTLLKQSES NGVIDTSNLA NDIATLALSI GSSSLAIHNF VSTDSTASFT 
FSLRLSQTQV HMLLQDRQFQ QARFLIHDLS FCEIPSKVPS LQKYTYTTDE RLMALRVRSS 
CAPQSFATPI LHRSELFVPI SRSSPVMLLD WMNLKGARGS GGLPYRSLHL TFYDMTCRYE 
YNTMWVQRLC SLLGQTQGRK EGNQVAGGES ESNASGGEFP EKQRLIRLFI SLADCNIDYS 
SPVQFETPSR LICRLGDVRI SSNVLLPAAP VQAVNLSVGD VSLYLCNRRF PYDFENSRIV 
GAEDLMKNPQ TVSAKDKRDF IPSSSESVLQ AMNCRTLVIL DTFDAVLRLA HHRSLTSSEP 
SVQVSFTVGE LGVFACKDSF KHLLATIGEP FRELTALNDR ALQDLKAKVD PFVTKTLVDE 
ASNKEMSYES LHRHTEALAS LKLRSALQPI TGTAAVLDRQ DDFLLDGYDW TAIGPDEPGS 
VGVIPPGDEQ SARWLGKSRE ISQSSDDQND DDPPLSGSPS SPLGIGKELS QGLTIITHHF 
PLQPLSDPLS AGDMGIQKYA GADAFPLIET RLVLHDMRVK VRLFDGFDWP ELIDREKLPF 
CKSGDFVIDE QTPSTNSKKA KTKATAAFVS TSRSNQHEHE KNRKAKLLGD LLDGNAIDAG 
TFKNVPLPEE RGLALKEQSE LRSLSRRTGK YIQFSASGIR LRLDLLEKSS NHRLVSCMNI 
RAHDFFLAET VSGSNPKKMA GEWLNEADHP RDTQEGLFMM KMVTWHPERR VTSDGAIASD 
ICEAAVTILP LRCNLDQRAI RFARQFFRTE LSVDDEIHRD LPSGLHQVPP PLFRLFRVRP 
FKVKVDYTPQ KVDRKALKDG AFVELVNLSP IDALILTLKK VEIEGKTGFG EVLPILIQSW 
IQEICSTQLL KFVTNMRPLE PITQVGETAV DMIVLPWEAF RNGDSVQKAI RSGTTSFAST 
LVYEAFTATS RVAGYVADQV GRLGREEFDR SNQPSRPLEA PRRATDAAPH ALQSVTRGLQ 
EANYKIVIIP YREYQRTGAR GAIRSVVKGI PVAIGAPTSA AAEAISYALL GARNQIRPDI 
RKEEESSQRG TEVEDAERVY ESACPFHLQS ENGDSSDGVD EAANPAL