| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_40261 |
|---|
| Symbol | |
|---|
| ID | 7195747 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011690 |
|---|
| Strand | + |
|---|
| Start bp | 545720 |
|---|
| End bp | 546655 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002184156 |
|---|
| Protein GI | 219127884 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAGTA GTAGCGGTCC CGAAAACGGT GCATCCGACC ACAGCGTCGA ACGCGGCTCA
AGCCATCATT CTCTATTCGT TGACGAAGAC GCAGCTCGTC TTTCCACAGG CGAGACTTCA
AATGAAGTAT TAGAACTGCA CCGTACATCA TTGGAGCGAT CCACAGATCC TACGTGTGCT
TCCTCCGATA TGAAAGAGTT CTTGGCATGC TTGTCTTTCT TAATAGTGAG CTTGGTGATT
GGAGGCCTAC CGATCAATCC TCGCCAACGG CCGATTCCAT ACCAGCTGCT TGAAGACATG
AAAATATACG TACGCAATCA AGTCTACAAC GAAAGATTTG AAGGCGAAAC GATACCAGAC
TTCTTGCTGT TGCTTCTGGC GATTATTTTA CCCTTTTTTT CCCAGATTTT CGTTTGTGTC
TTGCTTCGTC GAGCCGGTGA TAGACACAGG ACAGTATGCG TGTATCTCGT GGCGTTTGCC
ATAACTTTGT TAGTCATTGA TTTCGTCAAG TTGTACGTTG GTTATTTGCG ACCCATTTTC
TACGTTAGCT GCGAGCCAGA CGACGTCTAT GAAACTTGTA CGGATGGAGG TGGAGGTGAT
GTTCGCAAGT CGTTTCCGTC GGGTCACGCT GGAACAGCAT TTTGTGGCAT GACGTTGATT
GCATTGTATC TTCATACGAG AGTTGGTGTA CCTAGTGTAC AAACAATGGT CCGAGAAATG
TATTCCGACG GGAACGTCCG CTGGACAGTT GGGTACTCCA AGTCACCGAG TATGGCTAGA
TTGGTTTCAA TCCTATCGCT TACGCCCTTG ATGTTGGCTC TTTTTATCGC TGCCAGCCGC
GTCGTCGACA ACAAACATTT CCCGGCTGAT GTAGTTGGTG GTTCCGTTTT AGGAGCTTCG
ATTGCTGTAT TTACGCATAG CTTGTGGTTT CCTTAG
|
|---|
| Protein sequence | MSSSSGPENG ASDHSVERGS SHHSLFVDED AARLSTGETS NEVLELHRTS LERSTDPTCA
SSDMKEFLAC LSFLIVSLVI GGLPINPRQR PIPYQLLEDM KIYVRNQVYN ERFEGETIPD
FLLLLLAIIL PFFSQIFVCV LLRRAGDRHR TVCVYLVAFA ITLLVIDFVK LYVGYLRPIF
YVSCEPDDVY ETCTDGGGGD VRKSFPSGHA GTAFCGMTLI ALYLHTRVGV PSVQTMVREM
YSDGNVRWTV GYSKSPSMAR LVSILSLTPL MLALFIAASR VVDNKHFPAD VVGGSVLGAS
IAVFTHSLWF P
|
|---|
| |