Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_40176 |
Symbol | |
ID | 7195820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011690 |
Strand | + |
Start bp | 322624 |
End bp | 323544 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | |
GC content | 57% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184112 |
Protein GI | 219127792 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGCAGA GACGGCTTCG AAGTCAAGTA TGGGTAGCTC CATTCCTCGC ACTGGCACCA ACAGCGACGA AACCGAACGT GGCGGCGTTC TCGCGAGGCA GCTCGTTGCC TACAAGCACG CTCCAGGCCC AGAAGTCCAC CGATATTGTC TTTGTGCGTC ACGGATGTAC GTACATGAAC GAATACTTGG GTCAGGGGCC GTCGTTCGGA GCACCATACT TTACGGACGT CTTTCGGGAC GCGCCGGCAA GGGATCGCTA TCACGATACT CCCCTTAGCG AGCGCGGTTG GCGACAAGTC CGACAACTCC AAACGGACCA ACCTGACTTT GTGCACGATG TTGATCTCGT CGTTGTCAGT CCCCTACGAA GGGCTTTGCA AACCTTCCAT CTAGGTCTTT CCGAATGGGT AGGGCAACAG TCACCAGCCC TAGCCTCCGC CCGCACTCAC CCGTCTACTC CCCGCCGTCA CGTTCCCATC ATCGCACACC CCGCCGCAGC CGAGCGTTTG TATCTCGTCA GTGACGTTGG AAGACCAGTA TCACTCTTGA GGCAGGACTA TCCGTACATC GATTTCGACA CCCACTTTAC CGACGATCCA CAATGGTGGT GGCGGCACAA CCCTGTCGGT GACGGGCCCT ACCAAGAATG GCGTCCCACC GGACAAGGAC AAGCCTACGC TTGCTGGAGT GAACCACAGC ACGCCTTTGA CGCTCGCATG CATCATCTGT ACGCATTCTT GCGGACGCAG GTGGCAGGGG GAAAGTACCG TACGATTGCC GTAGTTTGTC ACCATGGCGT CATTGATTGG ATGCTGGGAC AAAACTTTGA CAACTGTCAG TGGCGTCGCG TTCCCTGGCA GGAAATTCAA CCGGCGGCCC TATCAATACC CACTACCACC GTGCGGAATG CGCCGAAATA G
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Protein sequence | MRQRRLRSQV WVAPFLALAP TATKPNVAAF SRGSSLPTST LQAQKSTDIV FVRHGCTYMN EYLGQGPSFG APYFTDVFRD APARDRYHDT PLSERGWRQV RQLQTDQPDF VHDVDLVVVS PLRRALQTFH LGLSEWVGQQ SPALASARTH PSTPRRHVPI IAHPAAAERL YLVSDVGRPV SLLRQDYPYI DFDTHFTDDP QWWWRHNPVG DGPYQEWRPT GQGQAYACWS EPQHAFDARM HHLYAFLRTQ VAGGKYRTIA VVCHHGVIDW MLGQNFDNCQ WRRVPWQEIQ PAALSIPTTT VRNAPK
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