Gene PHATRDRAFT_40176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_40176 
Symbol 
ID7195820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011690 
Strand
Start bp322624 
End bp323544 
Gene Length921 bp 
Protein Length306 aa 
Translation table 
GC content57% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184112 
Protein GI219127792 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGCAGA GACGGCTTCG AAGTCAAGTA TGGGTAGCTC CATTCCTCGC ACTGGCACCA 
ACAGCGACGA AACCGAACGT GGCGGCGTTC TCGCGAGGCA GCTCGTTGCC TACAAGCACG
CTCCAGGCCC AGAAGTCCAC CGATATTGTC TTTGTGCGTC ACGGATGTAC GTACATGAAC
GAATACTTGG GTCAGGGGCC GTCGTTCGGA GCACCATACT TTACGGACGT CTTTCGGGAC
GCGCCGGCAA GGGATCGCTA TCACGATACT CCCCTTAGCG AGCGCGGTTG GCGACAAGTC
CGACAACTCC AAACGGACCA ACCTGACTTT GTGCACGATG TTGATCTCGT CGTTGTCAGT
CCCCTACGAA GGGCTTTGCA AACCTTCCAT CTAGGTCTTT CCGAATGGGT AGGGCAACAG
TCACCAGCCC TAGCCTCCGC CCGCACTCAC CCGTCTACTC CCCGCCGTCA CGTTCCCATC
ATCGCACACC CCGCCGCAGC CGAGCGTTTG TATCTCGTCA GTGACGTTGG AAGACCAGTA
TCACTCTTGA GGCAGGACTA TCCGTACATC GATTTCGACA CCCACTTTAC CGACGATCCA
CAATGGTGGT GGCGGCACAA CCCTGTCGGT GACGGGCCCT ACCAAGAATG GCGTCCCACC
GGACAAGGAC AAGCCTACGC TTGCTGGAGT GAACCACAGC ACGCCTTTGA CGCTCGCATG
CATCATCTGT ACGCATTCTT GCGGACGCAG GTGGCAGGGG GAAAGTACCG TACGATTGCC
GTAGTTTGTC ACCATGGCGT CATTGATTGG ATGCTGGGAC AAAACTTTGA CAACTGTCAG
TGGCGTCGCG TTCCCTGGCA GGAAATTCAA CCGGCGGCCC TATCAATACC CACTACCACC
GTGCGGAATG CGCCGAAATA G
 
Protein sequence
MRQRRLRSQV WVAPFLALAP TATKPNVAAF SRGSSLPTST LQAQKSTDIV FVRHGCTYMN 
EYLGQGPSFG APYFTDVFRD APARDRYHDT PLSERGWRQV RQLQTDQPDF VHDVDLVVVS
PLRRALQTFH LGLSEWVGQQ SPALASARTH PSTPRRHVPI IAHPAAAERL YLVSDVGRPV
SLLRQDYPYI DFDTHFTDDP QWWWRHNPVG DGPYQEWRPT GQGQAYACWS EPQHAFDARM
HHLYAFLRTQ VAGGKYRTIA VVCHHGVIDW MLGQNFDNCQ WRRVPWQEIQ PAALSIPTTT
VRNAPK