Gene PHATRDRAFT_40111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_40111 
Symbol 
ID7195791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011690 
Strand
Start bp185910 
End bp186836 
Gene Length927 bp 
Protein Length308 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184077 
Protein GI219127718 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAAG CGAAGGTCTT GTACATTCAC GTGACGGGAC TTTCGGCAGA AATCCTGAAG 
AATCTAGTCT TGGCAGGAAT TCGGGCGGTG CTGTGCGATC CTCGGCCATA TCCCGATGCT
GTCGTCGCGT CTCCCAACTT TTTGCTACCT TGCGCCGATC GAAATTTTAC TGACGGTCAG
TCAAACCCCA AAAAGCAGAA ATATCTGACG GTCGCGGAAG CCATGCAACC TGTGGTTGAA
GAGCTTAATC CACTATTAGG CTCGTGTGAA ATTTCGCCGA CCTCTGTCGA TGAGCTGTCC
GATAAGTATG TCTCACAGTT TAGCATCGTG ATCGCATCGC AACTTCCGAA AACGGACGCC
CGACGCATTG CGAAAGCTAC GACAAATGCG GGAGGCAAAT TTTTCTTGGC CGATACCTTT
GGTATGATGG GAGCTTGCGC CTTGGATTTG GGTAGCAAGC ATATTTATAG ACCGGAAATT
GGCAAAACCT TGCTTGACCC AACTCCACTA AGAAGATACA TCTCCTTAGA TGAAGTGCTT
GATTGTCCGT TAGACCATGC TACGAACCGC TTTCATAAAA CACCTCCACC TGCATGGGTA
CAGTACCGCT GTTTGTTGGA ATACGGGGAC AAAAACAAAA GCTGGCCATC AGAACTGTCC
GCCGAAGTTT TTTTCGAGCA GACACGTTCA TGGATCAAAG AAACTGCTCC ATCTTTACTC
GAGAATGAGC TGTTGTCGGA GACATCTCTA AGAGCACTTG CAAAAGTCGC GACAAGCGAA
GTGGCTCCAG TTTGCTCTGT TTTGGGAGGA ATTATTGGAA ACGAGGTCAT CAAGGCGATC
AGTGGGAAAG GAGAACCAGC CAACAATGCC GTATTGTTCG ACGGGACTAC GTGCAAGGCG
TGGGGCTTTC TTGTAGATCC ACTGTAG
 
Protein sequence
MSQAKVLYIH VTGLSAEILK NLVLAGIRAV LCDPRPYPDA VVASPNFLLP CADRNFTDGQ 
SNPKKQKYLT VAEAMQPVVE ELNPLLGSCE ISPTSVDELS DKYVSQFSIV IASQLPKTDA
RRIAKATTNA GGKFFLADTF GMMGACALDL GSKHIYRPEI GKTLLDPTPL RRYISLDEVL
DCPLDHATNR FHKTPPPAWV QYRCLLEYGD KNKSWPSELS AEVFFEQTRS WIKETAPSLL
ENELLSETSL RALAKVATSE VAPVCSVLGG IIGNEVIKAI SGKGEPANNA VLFDGTTCKA
WGFLVDPL