Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_40092 |
Symbol | |
ID | 7195894 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011690 |
Strand | - |
Start bp | 141976 |
End bp | 143687 |
Gene Length | 1712 bp |
Protein Length | 456 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | Rad51 DNA recombination/repair protein |
Protein accession | XP_002184192 |
Protein GI | 219127959 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGATGG CGATACGGTT CGAAAGTAAT ACAGTAACCG TAAGTTGTGT GGTGTTTGTT TTCTCGGTGC GGAGAGCTCT TCGTCCCCGT CTGGCAGGTC GACCGTGTGG GCTCCAGCAA CCTATGGGAG AATTTCGGAC ACACACTGTT AGTGGTGTCT GTCCATCAAC AGGATCGGCG TACTGATAGC GCTGCCGCGA GTCCCTATTC GGTCGTGAAC GAGCAAAGTA TGACCGTGAG TTGTTCTTGA CGGTCAAGCA ACCTTCGTCG GCATTGGAGA GACGACCTAT ACAATCGCAG ACTTGGTGTG GACTTGCTAC CGATAGGCTA CAGTGGTGTA TCGTTCCAAA CAACGTTATG AGTACGGCTG ATCGCATTTT GGCGCGATTG CCGTTGCATC TATTTGAAAA CCTTGCCACC GACGGAAACA CAATTCCCGC ACGAGAACTA CGCGAGCAAA TATGCGCGTC ACTCGACACA TTGAACACGG CTTCCCGGAA TGGATCCGTT ACACACCGTA TAAGAACCGT TGGGCCGCTG CTGCAATGCT CAGCAGCCTC TCTAGTCCGC ACACTCGACC CTTTGCTCAC CTACGGTACG TAGTTACAAA GTCGTGTCTA CGTCAGTAAG CCGACATCCG TATGCTTACT TGACGATGCA TTTCTTGTCC GAAAGCAGAA CAATGCAATG AGTTTATGAG ACGATTATAT GTCGAGTGTT CGCCTTCTCC TCTGTCAGCC TTCGAGTTGC TGCACTCGAC AACCTCGTCT CTTAACGATT GCAATCGATG CGAAGAGACT TTTTCACGAA TGCGCTATTT GCCGACCGGT TTGGAGCCCT TGGATCAGGC ACTTCGGGGT GGTGTACGTG TGGGGACAAT CACTGAACTA GTTGGACCTG CTGGTGTAGG GAAAACACAG CTTGCCATGC AGCTGTGTAT CATGGCGTCC CGGTACGCGC AAGGATGCGT GTATGTGGAT ACGGAAAAGA AGTTGAGTGT TGCGAGACTT CGCGAGATTG CGTTACAACG GTCGTCTCGT GTCCCGGATA CAAACACGCA CGGTGAATTT TTGTATCCAA GTGACACAAC ATTGGTGGAA TCGACGGTTG ACATCTCTGC TACGTCGCGA AATTGCTTCC GGAGTCCCCA AGAAGTACTG GACAACGTAA CCGTCCATTC TCCATCGAAC ATAGACGAGC TTTTTGGTGC GCTCTCTGAA GTGGAGGATG AATTGTTTTC GCGCAATCAC CAATCAGTCG GGTCCTCGAA TGCCAAATTT CCGGTTCGTC TTTTGGTGCT GGACAGCATC GCGGCTCCGG CGCGTCGTGA TTTCGGCGCG GGATCTGCGC CTGAACTGGC GTCTACCGTG ATAAAAATTG CGCAAACGCT CAAACGGCTC GCGGATCAAC ATCATTTGGT TGTTGTCGTC ATTAACCAGG TTGGTTCCTC AATACTGGGC ACGGATGCCG TGATCGATCA AACCGGTATT CGCCCTGCGC TGGGCACTTC GTGGCATCAC TGTGTCTCGA CACGTGTGCT CTTTGAATTC GAGGCGGACC TTGTGTCAAG CTCATCACTG TCCAATTCAG ACGGTCCCCT TCGTGGAAGA GCGCCATCTC GACAACTGAG TGTTATCAAG AGTAATCTGA CTGGTCCAGG GAAGCCAATT GTGTTTGACT TGACTCTTTT TGGCATTGTC ATCAAAGCTT GA
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Protein sequence | MVMAIRFESN TVTDRRTDSA AASPYSVVNE QSMTTWCGLA TDRLQWCIVP NNVMSTADRI LARLPLHLFE NLATDGNTIP ARELREQICA SLDTLNTASR NGSVTHRIRT VGPLLQCSAA SLVRTLDPLL TYAFELLHST TSSLNDCNRC EETFSRMRYL PTGLEPLDQA LRGGVRVGTI TELVGPAGVG KTQLAMQLCI MASRYAQGCV YVDTEKKLSV ARLREIALQR SSRVPDTNTH GEFLYPSDTT LVESTVDISA TSRNCFRSPQ EVLDNVTVHS PSNIDELFGA LSEVEDELFS RNHQSVGSSN AKFPVRLLVL DSIAAPARRD FGAGSAPELA STVIKIAQTL KRLADQHHLV VVVINQVGSS ILGTDAVIDQ TGIRPALGTS WHHCVSTRVL FEFEADLVSS SSLSNSDGPL RGRAPSRQLS VIKSNLTGPG KPIVFDLTLF GIVIKA
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