Gene PHATRDRAFT_40044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_40044 
Symbol 
ID7195874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011690 
Strand
Start bp14209 
End bp14718 
Gene Length510 bp 
Protein Length169 aa 
Translation table 
GC content54% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184168 
Protein GI219127909 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00224901 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGTTGG TCATTCTGTC ACTTGCACTC CTGGTCGGTG TAGAAACAAG ACCACAATCG 
TTCGCCACGA CAAAGCGCGG AGAGTGCATG CCTTCCTCCG CGGACCTCAA TCACTACGTT
TGCTTTTCGG ATCGTCCGGT GGACGCTCTG GTGTATCAGT GTGCAGACTC GGAAGCCCTT
TGTCCAGATT GGGCCAAGGC TGGCGAATGC CAGAAGAACC CGGGCTACAT GCAGCTGGAA
TGTCGGCATA GTTGCGACAC CTGTGTCCCT CTGCATGTTG GTATGACACA GATTGCGCCT
CTTCAGGAAG CGCCAACGCA GCAACAAGTT CACGATCGGC TGGTACAGAC GCAACAGCAC
GTACACAGCA AGGCGAAAGA GAACTTCAAC GTACTACATA ACTGTCTTAA CTACCACGAA
CTGTGCACAT TCTGGGCAGT CGCGGGTGAG TGCGACAACA GTCCTGATTT TATGCTGCGG
ACCTGTCGGC CCGCGTGTTA CGTATGTTAG
 
Protein sequence
MRLVILSLAL LVGVETRPQS FATTKRGECM PSSADLNHYV CFSDRPVDAL VYQCADSEAL 
CPDWAKAGEC QKNPGYMQLE CRHSCDTCVP LHVGMTQIAP LQEAPTQQQV HDRLVQTQQH
VHSKAKENFN VLHNCLNYHE LCTFWAVAGE CDNSPDFMLR TCRPACYVC