| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_30389 |
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| Symbol | UBC1 |
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| ID | 7195722 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011690 |
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| Strand | - |
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| Start bp | 410351 |
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| End bp | 411714 |
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| Gene Length | 1364 bp |
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| Protein Length | 197 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | |
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| Product | ubiquitin-conjugating enzyme 1 |
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| Protein accession | XP_002184246 |
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| Protein GI | 219128071 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.651782 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTCTGCCGAG CTGGTGGTTG ATATTCTTCT GGTCTTGGAG CGTACGTGCA CCATTTCTCA
GCTGTTGTTA TCTTAGCACA GCTTACGTAT ATTCCTTGAC ATATCATGGC GGCTACCGCT
GGTGTTAACG GAAGACTTCT GAAAGAAGTG GCGGTGGTCC AGAAGGATGA CGCTTCCGGG
GTCACGGCTA CTCTTGTGAC GGAGGGTCAG CTGCGACACT TGAAAGGGAG CATTCAAGGT
CCTTCGGGAT CTCCATACGA GGGTGGTGTC TTTGAAATCG ATATTCATAT ACCGATTGAG
TATCCGTTCG AACCGCCGAA AATGAAATTT CTCACGAAAG TCTGGCACCC GAATATTTCG
TCGCAAACGG GTGCGATTTG TCTGGTAAGT AGTTACGAAA TGGTAAACAC TGTCGACGCT
AGTAGAATAC ACAAACTAAC TAGATGGAAT GCATATAATA GGATATTCTG AAAGACCAAT
GGAGTCCAGC TTTGACCATC AAGACAGCTT TGTTGTCGCT GTTGGCGTTG ATGTGTTCCC
CCGAACCGGG AGATCCACAG GATGCGGAAG TGGCAAAAAT GTATATGGGG AACCGTGAGG
AGTTCGATCG GACGGCAAAA TTCTGGACGG AATCGTACGC GAAGCCGTCG AGCAAGGAAG
ATGCCATTAG TAGGGTCTGT GAAATGGGTT TTGACCGTGA AAGCGCTCGT AATGCCTTGG
AAAAGCATTC ATGGAACGAG AGCGCGGCTG TGAATGCGCT GCTTGGCGGA GCATAGTAGT
CCGTAATCTT AGTTTCGACG ATCACAAGAA TGGTCGAATT TCAATTCTTT GAGATGATTC
TAACAGTAAT ACAGATTGGC AGCCGAGCGA AACTCTGATT CCATTCACCT TTCACCGCAC
AATTTAGATT TCTGTTTATC GACGGTGATC CAAGATGCCT CTTGCAGAAA GATTTCACGC
GAAATTTGCC GAAAACTGTC AAATTCTTGC CAGTTTTTCA AACATTGGGA CTCATTGTTT
CGATCCCAAA CTTTGGACAA AGCAGATTCT AGAAGTAGAA CATCTTCTTC CACATGTTGT
GACAGAAACG ACCATTCCAA AAGGTGCCAG CCTTTGCTTT TTGCCTGCTT GCTGTTGTCG
TATCGAGCTA GGCAAAATGG ACATTTCAGT TGCTTCAATA CCCATCGTTT TTCGCAGGAC
TCGCAGAGGG CGTGGCCGCA TCCTAGAATG GTATTTGATA TGCTGCTAAA GCATATCACA
CAATCGTCGT GGGGACCTTG GGTGAGTTTT GCCAATCCAA TACCTGACAA GGTCTCTTCA
GTTCCAATGA GCTCGCCCAG TCGGCGCAGC AAAGAAAAAA TCTT
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| Protein sequence | MAATAGVNGR LLKEVAVVQK DDASGVTATL VTEGQLRHLK GSIQGPSGSP YEGGVFEIDI
HIPIEYPFEP PKMKFLTKVW HPNISSQTGA ICLDILKDQW SPALTIKTAL LSLLALMCSP
EPGDPQDAEV AKMYMGNREE FDRTAKFWTE SYAKPSSKED AISRVCEMGF DRESARNALE
KHSWNESAAV NALLGGA
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