Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_23168 |
Symbol | |
ID | 7195882 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011690 |
Strand | - |
Start bp | 55784 |
End bp | 56602 |
Gene Length | 819 bp |
Protein Length | 252 aa |
Translation table | |
GC content | 55% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184176 |
Protein GI | 219127925 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.48578 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TCGGTATTAC CCAAACTCAT CCAACGCTCG TTCGATACCT TTCGTACCTT CGCGGTTGGC ATGACGCCGT CGGACTGGGC CGTGCCGGCT CCACCGGTAC CAACCGTTCC GGTAGCGGGG ACGGGACGGT CCTTTCCCGT ACACCGAATT TACTGTGTCG CGAGAAACTA CGCGGATCAC GTACGGGAAA TGGGTCAAGA TCCGGATCGA GAAGACCCCT GTTTCTTTAC CAAACCACCC GATGCGGTGG TACACTGCGG GACACTTGCA AACCGCAACC ACAACAACAA CTTTACCAGC GCTGCTCACA AAGTACCCGA TTTGGTCGAA ATTCCCTATC CCCTCGCCAC TTCCAATCTA CATTACGAAA TTGAATTGGC CGTGGCGATC GGTACGAGCG GAACCGCGAT TGCGGTGGAG GATGCACTGG CACACGTATT TGGCTACGCC GTGGCGGTCG ACTTGACGCG CCGGGATTTG CAACAAATCG CCAAAAATCG AGGGAGACCC TGGGATAGTG CCAAAGGTTT CGACCAATCC GCTCCTATTT CAAGCATCAT TCCGGTAACA ACCATGGTAC CGGACGCGGA CGCAAGCATT TGGCTCACCG TCAACCACAA AGCCGCGCAA TCTGGACAAT TGTCGCAAAT GATTTGGTCC GTGCCCGAGA TTGTGTCCCA CCTTTCGAAG GAATTCACAT TACTGCCAGG AGATTTGATT CTGACCGGAA CTCCGGCCGG AGTTGGTCCC ATTGTTCCGG GAGATACCGT TAGAGGGGGG ATAGAAGGAC TTGCCGAATT GGCCTTCCGG ATCCGATGA
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Protein sequence | MTPSDWAVPA PPVPTVPVAG TGRSFPVHRI YCVARNYADH VREMGQDPDR EDPCFFTKPP DAVVHCGTLA NRNHNNNFTS AAHKVPDLVE IPYPLATSNL HYEIELAVAI GTSGTAIAVE DALAHVFGYA VAVDLTRRDL QQIAKNRGRP WDSAKGFDQS APISSIIPVT TMVPDADASI WLTVNHKAAQ SGQLSQMIWS VPEIVSHLSK EFTLLPGDLI LTGTPAGVGP IVPGDTVRGG IEGLAELAFR IR
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