Gene PHATRDRAFT_23168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_23168 
Symbol 
ID7195882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011690 
Strand
Start bp55784 
End bp56602 
Gene Length819 bp 
Protein Length252 aa 
Translation table 
GC content55% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184176 
Protein GI219127925 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.48578 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TCGGTATTAC CCAAACTCAT CCAACGCTCG TTCGATACCT TTCGTACCTT CGCGGTTGGC 
ATGACGCCGT CGGACTGGGC CGTGCCGGCT CCACCGGTAC CAACCGTTCC GGTAGCGGGG
ACGGGACGGT CCTTTCCCGT ACACCGAATT TACTGTGTCG CGAGAAACTA CGCGGATCAC
GTACGGGAAA TGGGTCAAGA TCCGGATCGA GAAGACCCCT GTTTCTTTAC CAAACCACCC
GATGCGGTGG TACACTGCGG GACACTTGCA AACCGCAACC ACAACAACAA CTTTACCAGC
GCTGCTCACA AAGTACCCGA TTTGGTCGAA ATTCCCTATC CCCTCGCCAC TTCCAATCTA
CATTACGAAA TTGAATTGGC CGTGGCGATC GGTACGAGCG GAACCGCGAT TGCGGTGGAG
GATGCACTGG CACACGTATT TGGCTACGCC GTGGCGGTCG ACTTGACGCG CCGGGATTTG
CAACAAATCG CCAAAAATCG AGGGAGACCC TGGGATAGTG CCAAAGGTTT CGACCAATCC
GCTCCTATTT CAAGCATCAT TCCGGTAACA ACCATGGTAC CGGACGCGGA CGCAAGCATT
TGGCTCACCG TCAACCACAA AGCCGCGCAA TCTGGACAAT TGTCGCAAAT GATTTGGTCC
GTGCCCGAGA TTGTGTCCCA CCTTTCGAAG GAATTCACAT TACTGCCAGG AGATTTGATT
CTGACCGGAA CTCCGGCCGG AGTTGGTCCC ATTGTTCCGG GAGATACCGT TAGAGGGGGG
ATAGAAGGAC TTGCCGAATT GGCCTTCCGG ATCCGATGA
 
Protein sequence
MTPSDWAVPA PPVPTVPVAG TGRSFPVHRI YCVARNYADH VREMGQDPDR EDPCFFTKPP 
DAVVHCGTLA NRNHNNNFTS AAHKVPDLVE IPYPLATSNL HYEIELAVAI GTSGTAIAVE
DALAHVFGYA VAVDLTRRDL QQIAKNRGRP WDSAKGFDQS APISSIIPVT TMVPDADASI
WLTVNHKAAQ SGQLSQMIWS VPEIVSHLSK EFTLLPGDLI LTGTPAGVGP IVPGDTVRGG
IEGLAELAFR IR