Gene PHATRDRAFT_15968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_15968 
Symbol 
ID7195734 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011690 
Strand
Start bp468103 
End bp472803 
Gene Length4701 bp 
Protein Length1387 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184143 
Protein GI219127857 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AATCAAACGC TATTGTCGTT CTTGCGAGAT GTTTTGAGAC TGACTGGATC CAAATTGGGT 
TGTGCCGAGG GAGGATGCGG AGCTTGTACC GTTATGCTTT CCAAAAAGAA TGTGGATACT
GGCAAGATAA AGTACGTTGT AGTGCAGGTG TTCGATGCTT GTGTCGCATC GTCGTGGCCT
TGCCAATGAA TAACTTGTAT ACTGACCCCA AAGGGTTGTT GTACTTGGAC TCGTTCTCAT
ATTGCGACAG ACACTTTTCG GTCAATGCAT GTCTCATGCC CGTGTTGGCT GCCGACGGGT
GCCACGTGAC AACTGTGGAG GGGATTGGAA CCGTCAAAAA CGACAATTTG CACCCCGTGC
AGAATGCCAT GGTTGATATG CACGGATCAC AGTGTGGTTT CTGTACACCC GGAATAATTG
TGTCGATCTA TGCTCTCCTG GCCAACAATC CTACCACCGC ATACCTCGAA GAACATTTGG
ATGGCAATTT ATGTCGTTGT ACCGGTACGT TGGAGGTCGG TCGGTTGGTT GGAGAATTAT
TATTTTTGCC ATCGAACGGT ATTGATACAA GTTCCTTACC TCTTTGCTAC CGATCTTTAC
CAATAGGATA CCGCCCAATT TGGGACGCGG CGCGTTCCTT GTGCGACGAC GGCGAAGAAC
TTGTCAAAGG TCCTTGCGGA ACAGCGTGCC GCGAATGCCC GGAACGCGAG GCTTGCGATC
AAGACTGCAA CGTCCAAGAC AAGGCGACGT CCGCCGACAA CATGTGCTGC TCATCGTCCA
AGGATAAAAT GAGTACTTAC AAGGAGACTT TCCTAACAAA CAAGGATTCT TGGAGAGCGC
AACCGAATGT TATGTTTCCC AAGGTATTGA TGGACACAGC CTCGGTCGAA AGTACCCTCT
TAACGAAACC ACTCATGATT GTGGACCGTT CTGAATATCA CACTGGAGGC ACCTGGTTTA
AACCTACGAC TTTTGCTGGA CTTTTGGCAC TTTTGCAGGA GTTTGGCGGT ACTGGGACAG
GAGCTTGCAA AATTGTGGTT GGAAATACGG AAGTCGGCAT TGAAACAAGG TTCAAATACG
CGGTCTACCC TCGCTTGATT AGCCCATCGG AGTCTATCAG GGAGTTGTTT GGCTTTGAAG
TCTCCGGTGC TAATCTGATA ATTGGCTCGT GCTGTCCCTT GAGCACGATT CAGCATCATT
GCAATGCACT CGGCGAGCAA GATCTCCTCG TCCGCACCGT CATGCCCATA CACGATATGC
TTCGCTGGTT TGCTTCGACT CAGATTCGTA ACGTGGCATG TTTGGGTGGA AATCTTGTGA
CAGCGAGTCC GATCTCGGAC ATGAATCCGA TGTTGGCTAG CATGGGAGCC AAACTGGTCA
TTGCCTCTTT GGACGCAACG GACAAAACGA CGATTTGCCG TCGTTATGTC GACGTGTCGG
ACTTTTTTGT CAAGTATCGT ACGGTCGATC TCAAGCCCAC GGAAATTTTG GAACGCATCG
AAGTTCCTGT TCTTCGGAAC CCGTTCGAAT ACCTCAAGCC TTTTAAGCAA GCCCGCCGTC
GTGAGGACGA TATAAGTATC GTGACTTCGG GCATGCGCCT AAAACTCACA GTTGTGGATC
ACGAATATAT CATTGAAGAA GCATCTCTGG CTTTTGGAGG TATGGCTCCG ACTACCGTTC
TGGCGACCGA AACTGTCAAG ATCTTGATTG GATCCGCATT TTGTGCTAAA TCTTTCGAAA
GCGCGACGGA AGCCCTCCTC CAGGAGTTGA GTTTACCCGA AGCCGTTCCA GGAGGTCAAG
CAGCGTTCCG AATGACACTT GCTACATCGT TCTTGTACAA GTTCTTTCTC TCTGTTGTGG
CTGATCTCAA GGCAGACATA TCCGCTATAC GAGCAAACCC ATCGGCTTAC CCCGGAATGG
AAGTAGATCT TCCCGACCCT CCTTCAGTTG ATACAATGGA AGAAAGCGGA ACGGTGAACT
TCTTGAGCGC AAAGAAACCG AATTATTCGG GAGTGCAAGT TTATCCCGCT GCTAAGGTGG
CCAGCGGCCT AGAAGACAAG CTTTATCCTG CTGTTAAAAG CGCACGTGCA GCGGCAGAGA
CCACTGTTGT TGGAAAGGCT TCGGCCCACC AATCTGGTCC TTTGCACTGC ACTGGAGAAG
CAGCGTACTG CGACGACATC CCAATGCCTG CTGGAACGCT GCAGGCATGT TTGGTGTTGG
CAAGGGAGTG TGGGGGAGTG TTTGAAGCCA TGGATGTTGC AGAAGCTTTA GCTATTCCTG
GAGTTATAGG TATTTACAAC TACGATAGTC TCGTCGGGCT TGGTGGTAGC AATGAGCTAG
GACCTATCAT TCATGACGAG ACGGTCTTTC TTCGTCCCGG TGACATTGTT CGAACGGTTG
GGCAAGTGCT TGGAATCGCG GTGGCGGAGA CTTTGGAAGC AGCCGAGTTC GCCGCGCGTA
CTGTACATGT GACTTGTAGT CAGCCGAAAG AAAAAGTTGT TGTTACGGTT GAAGATGCTA
TTGAAACCGG GAGTTTTTAC GAATTTTCCC GTCATAGTAT GGAACGCGGT GACATTGCAA
TAATCGACAG CCTTGCGACG ATCGCCGACT CGACGGGCAC ACCTTCTTTA GGAGATGTTG
TAAAGATTTC GGGAACATTC CGATCCGGAG CTCAAGAACA CTTTTATCTC GAGACTAATG
CGGCATTGGT AATTCCTTCC GAGTCGGATA CAAACTTGAC GATATACGCC TCAACGCAAG
CGCCTACCGA AACGCAAGCT TATTGTGCCT CAGCGACGGG GACGCCAGCT TCGAAGGTTG
TTGTCCGTAT GAAACGAATG GGTGGGGGTT TCGGGGGGAA AGAAACTCGC AGCGTTTTTG
CTGCTTGCGC GGCGGCTGTG GCTGCCAAAT GCGCGAGCCG ACCCATTCGC CTTACTTTAT
CGCGTGACGT CGATATGAAG ATCACGGGTA CACGCCATGT CTTTCTTTCC AAGTACCATG
CTAGCGCCCA GATCACTGAA AACGGCGCTA AACTGGTAGC CTTTGACGTC AAATTGTTTG
CGAATGGCGG TAGTAGCTTT GATTTGTCCG GTATGTCCCC TACCTACACA CAAAATCCAA
ATTTCAAAAT TGACGTTGTT GTGCTAATGT CGTTTGCCTC TTTTGTGGAC GTAGGACCCG
TGGTCGATAG AGCACTGTTT CATGTGGATG GTGTCTACAT GTTTCCGAGC TTTCGTGCGG
AAGGTGTGCC TTGCAAAACC GTGCAGGCCC CTCATACTGC GTTCCGTGGC TTTGGAGGTC
CCCAAGGAAT GGCTGTTGTT GAGCACGTAA TGGACCACTT GGCACTCGCC ACCAATGTTG
ATGCTGATAA GTTGCGTCGC ATGAATATGT ATAACGATGG TGAAGCCACC CCATTCGGTA
TGATTGTGGG TGGACATCAT AGTGGGAACT GGAATGTTCC CGTCATGTGG GATCGTTTGG
TACAAGAACT TGACGTTCCT CACCGTCGAG AGCGTATTGC CCAGTTCAAC GCCAAACACA
AATGGTTGAA GCGAGGCTTG TGTCTCATTC CGACCCGGTT TGGTATTGCG TTCACAACAA
AGTTTATGAA CCAAGGTGGT GCATTGGTAC ATTTGTATGT CGACGGAACG GTGCTAGTGA
CGCATGGAGG GACGGAGATG GGCCAAGGCC TTCACACGAA GGTTTGTCAG GTCGCCGCAC
AATCATTTGG TATTCCTCTG AACGACGTCT ATGTAAATGA TACGAGTACG GATAAAGTTG
CCAACAGCCT ACCGACTGCT GCGAGCATGT CTACGGACAC GTACGGAATG GCTACGCTGG
ATGCTTGTCG TCAGATATTG AAACGGCTGG AGCCATTTCG AGAAAAACTT GGCGCCGATG
CTCCGTTGAA AGATGTAGCC CATGCTGCGT TTTTTGCCCG CGTCGACTTG ACCGCGCACG
GTTTCTTTAC CGTCGACGAC AAGCGTTGTG GTTTCGACTG GAAGAAGGAG AGACCGGAGG
GGTTTCCCGA CGACAAGCCG GCCAACTCCT GGAGAGGGAA TCCGTTCAAC TATTTTACGC
AAGGAGTTGT TTGTACGGAA GTGGAAATTG ACGTGTTGAG TGGGAACCAC CGCACTTTGC
AATCCGATTT ACTCGTTGAT GTTGGTGCGA GTATCAATCC GGCAATTGAC ATTGGACAGA
TTGAGGGTGC ATTTGTCCAG GGCATGGGTT GGAGTACAAT CGAGGAAGTG ACGTACGCTG
ACGACGATCA TACCTGGATC CGTCCTCGTG GCTCATTGTT TACCTCTGGA CCAGGCACGT
ACAAGATACC AGCGTTTAAC GACGTTCCCG AGACTTTTAA CGTGAGTTTG ATGGACAATG
TGGATAATCC GTTTGCGGTA CACAGTAGCA AGGCCATTGG CGAGCCTCCT TTCTTTTTGG
GAGCATCGGT AAGTATACAC ACGATATCTA TGTTCTGGAC GATAGCCAAG TGGTGGGTAG
TGTATTTGGT TCCACTGGAT GACAGAAAGT CTCACGATTC CACTTTTTAT GTGGTAGGTA
TTTTACGCCA TTAAGGATGC GGTGACGGCC GCCCGTAGCC AGAACTTGGG CCAAACGTCG
TACTTTGAGA TGCGAATGCC AGCGACTAGT GAACGTATCC GTATGTACTG TGCCGATCCA
CTGGCGAGTC AGGCAGTGTC G
 
Protein sequence
NQTLLSFLRD VLRLTGSKLG CAEGGCGACT VMLSKKNVDT GKIKHFSVNA CLMPVLAADG 
CHVTTVEGIG TVKNDNLHPV QNAMVDMHGS QCGFCTPGII VSIYALLANN PTTAYLEEHL
DGNLCRCTGY RPIWDAARSL CDDGEELVKG PCGTACRECP EREACDQDCN VQDKATSADN
MCCSSSKDKM STYKETFLTN KDSWRAQPNV MFPKVLMDTA SVESTLLTKP LMIVDRSEYH
TGGTWFKPTT FAGLLALLQE FGGTGTGACK IVVGNTEVGI ETRFKYAVYP RLISPSESIR
ELFGFEVSGA NLIIGSCCPL STIQHHCNAL GEQDLLVRTV MPIHDMLRWF ASTQIRNVAC
LGGNLVTASP ISDMNPMLAS MGAKLVIASL DATDKTTICR RYVDVSDFFV KYRTVDLKPT
EILERIEVPV LRNPFEYLKP FKQARRREDD ISIVTSGMRL KLTVVDHEYI IEEASLAFGG
MAPTTVLATE TVKILIGSAF CAKSFESATE ALLQELSLPE AVPGGQAAFR MTLATSFLYK
FFLSVVADLK ADISAIRANP SAYPGMEVDL PDPPSVDTME ESGTTTVVGK ASAHQSGPLH
CTGEAAYCDD IPMPAGTLQA CLVLARECGG VFEAMDVAEA LAIPGVIGIY NYDSLVGLGG
SNELGPIIHD ETVFLRPGDI VRTVGQVLGI AVAETLEAAE FAARTVHVTC SQPKEKVVVT
VEDAIETGSF YEFSRHSMER GDIAIIDSLA TIADSTGTPS LGDVVKISGT FRSGAQEHFY
LETNAALVIP SESDTNLTIY ASTQAPTETQ AYCASATGTP ASKVVVRMKR MGGGFGGKET
RSVFAACAAA VAAKCASRPI RLTLSRDVDM KITGTRHVFL SKYHASAQIT ENGAKLVAFD
VKLFANGGSS FDLSGPVVDR ALFHVDGVYM FPSFRAEGVP CKTVQAPHTA FRGFGGPQGM
AVVEHVMDHL ALATNVDADK LRRMNMYNDG EATPFGMIVG GHHSGNWNVP VMWDRLVQEL
DVPHRRERIA QFNAKHKWLK RGLCLIPTRF GIAFTTKFMN QGGALVHLYV DGTVLVTHGG
TEMGQGLHTK VCQVAAQSFG IPLNDVYVND TSTDKVANSL PTAASMSTDT YGMATLDACR
QILKRLEPFR EKLGADAPLK DVAHAAFFAR VDLTAHGFFT VDDKRCGFDW KKERPEGFPD
DKPANSWRGN PFNYFTQGVV CTEVEIDVLS GNHRTLQSDL LVDVGASINP AIDIGQIEGA
FVQGMGWSTI EEVTYADDDH TWIRPRGSLF TSGPGTYKIP AFNDVPETFN VSLMDNVDNP
FAVHSSKAIG EPPFFLGASV FYAIKDAVTA ARSQNLGQTS YFEMRMPATS ERIRMYCADP
LASQAVS