Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_15968 |
Symbol | |
ID | 7195734 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011690 |
Strand | + |
Start bp | 468103 |
End bp | 472803 |
Gene Length | 4701 bp |
Protein Length | 1387 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184143 |
Protein GI | 219127857 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | AATCAAACGC TATTGTCGTT CTTGCGAGAT GTTTTGAGAC TGACTGGATC CAAATTGGGT TGTGCCGAGG GAGGATGCGG AGCTTGTACC GTTATGCTTT CCAAAAAGAA TGTGGATACT GGCAAGATAA AGTACGTTGT AGTGCAGGTG TTCGATGCTT GTGTCGCATC GTCGTGGCCT TGCCAATGAA TAACTTGTAT ACTGACCCCA AAGGGTTGTT GTACTTGGAC TCGTTCTCAT ATTGCGACAG ACACTTTTCG GTCAATGCAT GTCTCATGCC CGTGTTGGCT GCCGACGGGT GCCACGTGAC AACTGTGGAG GGGATTGGAA CCGTCAAAAA CGACAATTTG CACCCCGTGC AGAATGCCAT GGTTGATATG CACGGATCAC AGTGTGGTTT CTGTACACCC GGAATAATTG TGTCGATCTA TGCTCTCCTG GCCAACAATC CTACCACCGC ATACCTCGAA GAACATTTGG ATGGCAATTT ATGTCGTTGT ACCGGTACGT TGGAGGTCGG TCGGTTGGTT GGAGAATTAT TATTTTTGCC ATCGAACGGT ATTGATACAA GTTCCTTACC TCTTTGCTAC CGATCTTTAC CAATAGGATA CCGCCCAATT TGGGACGCGG CGCGTTCCTT GTGCGACGAC GGCGAAGAAC TTGTCAAAGG TCCTTGCGGA ACAGCGTGCC GCGAATGCCC GGAACGCGAG GCTTGCGATC AAGACTGCAA CGTCCAAGAC AAGGCGACGT CCGCCGACAA CATGTGCTGC TCATCGTCCA AGGATAAAAT GAGTACTTAC AAGGAGACTT TCCTAACAAA CAAGGATTCT TGGAGAGCGC AACCGAATGT TATGTTTCCC AAGGTATTGA TGGACACAGC CTCGGTCGAA AGTACCCTCT TAACGAAACC ACTCATGATT GTGGACCGTT CTGAATATCA CACTGGAGGC ACCTGGTTTA AACCTACGAC TTTTGCTGGA CTTTTGGCAC TTTTGCAGGA GTTTGGCGGT ACTGGGACAG GAGCTTGCAA AATTGTGGTT GGAAATACGG AAGTCGGCAT TGAAACAAGG TTCAAATACG CGGTCTACCC TCGCTTGATT AGCCCATCGG AGTCTATCAG GGAGTTGTTT GGCTTTGAAG TCTCCGGTGC TAATCTGATA ATTGGCTCGT GCTGTCCCTT GAGCACGATT CAGCATCATT GCAATGCACT CGGCGAGCAA GATCTCCTCG TCCGCACCGT CATGCCCATA CACGATATGC TTCGCTGGTT TGCTTCGACT CAGATTCGTA ACGTGGCATG TTTGGGTGGA AATCTTGTGA CAGCGAGTCC GATCTCGGAC ATGAATCCGA TGTTGGCTAG CATGGGAGCC AAACTGGTCA TTGCCTCTTT GGACGCAACG GACAAAACGA CGATTTGCCG TCGTTATGTC GACGTGTCGG ACTTTTTTGT CAAGTATCGT ACGGTCGATC TCAAGCCCAC GGAAATTTTG GAACGCATCG AAGTTCCTGT TCTTCGGAAC CCGTTCGAAT ACCTCAAGCC TTTTAAGCAA GCCCGCCGTC GTGAGGACGA TATAAGTATC GTGACTTCGG GCATGCGCCT AAAACTCACA GTTGTGGATC ACGAATATAT CATTGAAGAA GCATCTCTGG CTTTTGGAGG TATGGCTCCG ACTACCGTTC TGGCGACCGA AACTGTCAAG ATCTTGATTG GATCCGCATT TTGTGCTAAA TCTTTCGAAA GCGCGACGGA AGCCCTCCTC CAGGAGTTGA GTTTACCCGA AGCCGTTCCA GGAGGTCAAG CAGCGTTCCG AATGACACTT GCTACATCGT TCTTGTACAA GTTCTTTCTC TCTGTTGTGG CTGATCTCAA GGCAGACATA TCCGCTATAC GAGCAAACCC ATCGGCTTAC CCCGGAATGG AAGTAGATCT TCCCGACCCT CCTTCAGTTG ATACAATGGA AGAAAGCGGA ACGGTGAACT TCTTGAGCGC AAAGAAACCG AATTATTCGG GAGTGCAAGT TTATCCCGCT GCTAAGGTGG CCAGCGGCCT AGAAGACAAG CTTTATCCTG CTGTTAAAAG CGCACGTGCA GCGGCAGAGA CCACTGTTGT TGGAAAGGCT TCGGCCCACC AATCTGGTCC TTTGCACTGC ACTGGAGAAG CAGCGTACTG CGACGACATC CCAATGCCTG CTGGAACGCT GCAGGCATGT TTGGTGTTGG CAAGGGAGTG TGGGGGAGTG TTTGAAGCCA TGGATGTTGC AGAAGCTTTA GCTATTCCTG GAGTTATAGG TATTTACAAC TACGATAGTC TCGTCGGGCT TGGTGGTAGC AATGAGCTAG GACCTATCAT TCATGACGAG ACGGTCTTTC TTCGTCCCGG TGACATTGTT CGAACGGTTG GGCAAGTGCT TGGAATCGCG GTGGCGGAGA CTTTGGAAGC AGCCGAGTTC GCCGCGCGTA CTGTACATGT GACTTGTAGT CAGCCGAAAG AAAAAGTTGT TGTTACGGTT GAAGATGCTA TTGAAACCGG GAGTTTTTAC GAATTTTCCC GTCATAGTAT GGAACGCGGT GACATTGCAA TAATCGACAG CCTTGCGACG ATCGCCGACT CGACGGGCAC ACCTTCTTTA GGAGATGTTG TAAAGATTTC GGGAACATTC CGATCCGGAG CTCAAGAACA CTTTTATCTC GAGACTAATG CGGCATTGGT AATTCCTTCC GAGTCGGATA CAAACTTGAC GATATACGCC TCAACGCAAG CGCCTACCGA AACGCAAGCT TATTGTGCCT CAGCGACGGG GACGCCAGCT TCGAAGGTTG TTGTCCGTAT GAAACGAATG GGTGGGGGTT TCGGGGGGAA AGAAACTCGC AGCGTTTTTG CTGCTTGCGC GGCGGCTGTG GCTGCCAAAT GCGCGAGCCG ACCCATTCGC CTTACTTTAT CGCGTGACGT CGATATGAAG ATCACGGGTA CACGCCATGT CTTTCTTTCC AAGTACCATG CTAGCGCCCA GATCACTGAA AACGGCGCTA AACTGGTAGC CTTTGACGTC AAATTGTTTG CGAATGGCGG TAGTAGCTTT GATTTGTCCG GTATGTCCCC TACCTACACA CAAAATCCAA ATTTCAAAAT TGACGTTGTT GTGCTAATGT CGTTTGCCTC TTTTGTGGAC GTAGGACCCG TGGTCGATAG AGCACTGTTT CATGTGGATG GTGTCTACAT GTTTCCGAGC TTTCGTGCGG AAGGTGTGCC TTGCAAAACC GTGCAGGCCC CTCATACTGC GTTCCGTGGC TTTGGAGGTC CCCAAGGAAT GGCTGTTGTT GAGCACGTAA TGGACCACTT GGCACTCGCC ACCAATGTTG ATGCTGATAA GTTGCGTCGC ATGAATATGT ATAACGATGG TGAAGCCACC CCATTCGGTA TGATTGTGGG TGGACATCAT AGTGGGAACT GGAATGTTCC CGTCATGTGG GATCGTTTGG TACAAGAACT TGACGTTCCT CACCGTCGAG AGCGTATTGC CCAGTTCAAC GCCAAACACA AATGGTTGAA GCGAGGCTTG TGTCTCATTC CGACCCGGTT TGGTATTGCG TTCACAACAA AGTTTATGAA CCAAGGTGGT GCATTGGTAC ATTTGTATGT CGACGGAACG GTGCTAGTGA CGCATGGAGG GACGGAGATG GGCCAAGGCC TTCACACGAA GGTTTGTCAG GTCGCCGCAC AATCATTTGG TATTCCTCTG AACGACGTCT ATGTAAATGA TACGAGTACG GATAAAGTTG CCAACAGCCT ACCGACTGCT GCGAGCATGT CTACGGACAC GTACGGAATG GCTACGCTGG ATGCTTGTCG TCAGATATTG AAACGGCTGG AGCCATTTCG AGAAAAACTT GGCGCCGATG CTCCGTTGAA AGATGTAGCC CATGCTGCGT TTTTTGCCCG CGTCGACTTG ACCGCGCACG GTTTCTTTAC CGTCGACGAC AAGCGTTGTG GTTTCGACTG GAAGAAGGAG AGACCGGAGG GGTTTCCCGA CGACAAGCCG GCCAACTCCT GGAGAGGGAA TCCGTTCAAC TATTTTACGC AAGGAGTTGT TTGTACGGAA GTGGAAATTG ACGTGTTGAG TGGGAACCAC CGCACTTTGC AATCCGATTT ACTCGTTGAT GTTGGTGCGA GTATCAATCC GGCAATTGAC ATTGGACAGA TTGAGGGTGC ATTTGTCCAG GGCATGGGTT GGAGTACAAT CGAGGAAGTG ACGTACGCTG ACGACGATCA TACCTGGATC CGTCCTCGTG GCTCATTGTT TACCTCTGGA CCAGGCACGT ACAAGATACC AGCGTTTAAC GACGTTCCCG AGACTTTTAA CGTGAGTTTG ATGGACAATG TGGATAATCC GTTTGCGGTA CACAGTAGCA AGGCCATTGG CGAGCCTCCT TTCTTTTTGG GAGCATCGGT AAGTATACAC ACGATATCTA TGTTCTGGAC GATAGCCAAG TGGTGGGTAG TGTATTTGGT TCCACTGGAT GACAGAAAGT CTCACGATTC CACTTTTTAT GTGGTAGGTA TTTTACGCCA TTAAGGATGC GGTGACGGCC GCCCGTAGCC AGAACTTGGG CCAAACGTCG TACTTTGAGA TGCGAATGCC AGCGACTAGT GAACGTATCC GTATGTACTG TGCCGATCCA CTGGCGAGTC AGGCAGTGTC G
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Protein sequence | NQTLLSFLRD VLRLTGSKLG CAEGGCGACT VMLSKKNVDT GKIKHFSVNA CLMPVLAADG CHVTTVEGIG TVKNDNLHPV QNAMVDMHGS QCGFCTPGII VSIYALLANN PTTAYLEEHL DGNLCRCTGY RPIWDAARSL CDDGEELVKG PCGTACRECP EREACDQDCN VQDKATSADN MCCSSSKDKM STYKETFLTN KDSWRAQPNV MFPKVLMDTA SVESTLLTKP LMIVDRSEYH TGGTWFKPTT FAGLLALLQE FGGTGTGACK IVVGNTEVGI ETRFKYAVYP RLISPSESIR ELFGFEVSGA NLIIGSCCPL STIQHHCNAL GEQDLLVRTV MPIHDMLRWF ASTQIRNVAC LGGNLVTASP ISDMNPMLAS MGAKLVIASL DATDKTTICR RYVDVSDFFV KYRTVDLKPT EILERIEVPV LRNPFEYLKP FKQARRREDD ISIVTSGMRL KLTVVDHEYI IEEASLAFGG MAPTTVLATE TVKILIGSAF CAKSFESATE ALLQELSLPE AVPGGQAAFR MTLATSFLYK FFLSVVADLK ADISAIRANP SAYPGMEVDL PDPPSVDTME ESGTTTVVGK ASAHQSGPLH CTGEAAYCDD IPMPAGTLQA CLVLARECGG VFEAMDVAEA LAIPGVIGIY NYDSLVGLGG SNELGPIIHD ETVFLRPGDI VRTVGQVLGI AVAETLEAAE FAARTVHVTC SQPKEKVVVT VEDAIETGSF YEFSRHSMER GDIAIIDSLA TIADSTGTPS LGDVVKISGT FRSGAQEHFY LETNAALVIP SESDTNLTIY ASTQAPTETQ AYCASATGTP ASKVVVRMKR MGGGFGGKET RSVFAACAAA VAAKCASRPI RLTLSRDVDM KITGTRHVFL SKYHASAQIT ENGAKLVAFD VKLFANGGSS FDLSGPVVDR ALFHVDGVYM FPSFRAEGVP CKTVQAPHTA FRGFGGPQGM AVVEHVMDHL ALATNVDADK LRRMNMYNDG EATPFGMIVG GHHSGNWNVP VMWDRLVQEL DVPHRRERIA QFNAKHKWLK RGLCLIPTRF GIAFTTKFMN QGGALVHLYV DGTVLVTHGG TEMGQGLHTK VCQVAAQSFG IPLNDVYVND TSTDKVANSL PTAASMSTDT YGMATLDACR QILKRLEPFR EKLGADAPLK DVAHAAFFAR VDLTAHGFFT VDDKRCGFDW KKERPEGFPD DKPANSWRGN PFNYFTQGVV CTEVEIDVLS GNHRTLQSDL LVDVGASINP AIDIGQIEGA FVQGMGWSTI EEVTYADDDH TWIRPRGSLF TSGPGTYKIP AFNDVPETFN VSLMDNVDNP FAVHSSKAIG EPPFFLGASV FYAIKDAVTA ARSQNLGQTS YFEMRMPATS ERIRMYCADP LASQAVS
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