Gene PHATRDRAFT_15948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_15948 
Symbol 
ID7195726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011690 
Strand
Start bp423599 
End bp424384 
Gene Length786 bp 
Protein Length262 aa 
Translation table 
GC content57% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184249 
Protein GI219128078 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CCGACCGTTG GTATTATTTG CGGCTCGGGA CTTTCTGGTC TAGCGGCGAC CTTGGACGGT 
CCCACCTTGA CGGTACCGTA CGCTGATATT CCGGGCTTTC CCGCACACTG CACGGTAGCC
GGACACAAGG GTGAAGTAGT GTTTGGTTCG ATCCACGGCG TGCAGGCCAT TTGTTTCCGG
GGTCGCTTTC ATTCCTACGA AGGCCACGAC ATGAAGACGG TTGTCTTGCC CGTCTACGTC
ATGCGCTGCC TCGACACCAA AATTGTCATC ATCACTAACG CTGCTGGAGG ATTGAATCCG
GATTATAACG TAGGAGATGT AGTTGCAGTC TCGGATCACT TGGCCTTGCC GCAGTTGGCC
GGGAAGAATC CCTTGATTGG ACCCAATGAC GACGAATTGG GTCCCCGTTT CCCCGCCACC
AGCGACGCCT ATCCCGACGC CTTGAGGATT GCCGCTACGC ACGCCGCCGA ATCTCTCAAT
ATGCAAGAGT ACTGGCATCC CCACGGAACT TACTGCTTCG TCTCCGGACC CATGTACGAA
AGCAAAGCGG AGTGTCGCTT GCTTCGCACC CTCGGAGGCG ACGCCGTGGG TATGTCCACG
ATTCCCGAAG TCGTGGCTGC GCACCACTGC GAGCTTAAAG TCCTCTGCCT TAGTCTCATC
ACCAACAAGG TGGTCATGGA GGGCGACGAA GGTGCGACGG TCGCGACACA CGCCGAAGTT
CTCGAAGCCG TCCAGGCCCG CTCGGTTCAG ATGCAAACAC TCGTCAAGGA AATTGTGGCC
AATCTC
 
Protein sequence
PTVGIICGSG LSGLAATLDG PTLTVPYADI PGFPAHCTVA GHKGEVVFGS IHGVQAICFR 
GRFHSYEGHD MKTVVLPVYV MRCLDTKIVI ITNAAGGLNP DYNVGDVVAV SDHLALPQLA
GKNPLIGPND DELGPRFPAT SDAYPDALRI AATHAAESLN MQEYWHPHGT YCFVSGPMYE
SKAECRLLRT LGGDAVGMST IPEVVAAHHC ELKVLCLSLI TNKVVMEGDE GATVATHAEV
LEAVQARSVQ MQTLVKEIVA NL