Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_15870 |
Symbol | |
ID | 7195941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011690 |
Strand | - |
Start bp | 326909 |
End bp | 327757 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184230 |
Protein GI | 219128038 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.296862 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGAACAT GGCCAAAGAT TCATCCCAAG CGAGTCCGTG TGATTACGTG TGATGTGACT GGAACACTTG TATCATTTCG TGGGTCGATT GAAGAACACT ATCTTGGATC GGCACAGAAA TGTGGTATTG ATTTCGTCCC AGATGATCCT GCGAGTTCCA CTGGTCATAA TGGCCCTCTG CCTATTCACA AGGCCTTCAG CCAAGGCTAT AGGGAATGTT GCCAAATATA TCCTTGCTTC GGTGGCCATG ACATTTCGGC GAAAGAATGG TGGAAACGGT GTGTACTCCG TTCCTTCGAA CTTGCTGGTG CCAGAATGAA CGAAGCGCAA CAAGAAGCTG TTTTTCAACG AATTTACTCC ATATTTGGTT CTCAAGCTTG CTATGAAAAA TTCGACGATG CGCTACCTTT TTTACAATGG GCAAACCGTA GTCGCATAGT GTGCGGTGTC TTGAGCAACG CTGACGAACG GTACGGTGAC TCCATACTAC CCATGCTCGG TTTGACGCAC GACGAGTTAC AATTTCAATG TTTTTCCAAA GATTTTGGCT TGGAAAAACC GGATGCCCGA TTCTTTCTGG CAGCACTCAA GCAAGCTGAG CTGTATTTAG TATCACAGAA CTCGTACGAC GTAAACGATC CTTTGCTTCC CTCTCAAGTC CTTCACATCG GGAACGATTT CCAAAAGGAC TTTGAGGGGG CTCGTCGAGC AGGGATGCAC GCGGCACTCT TGAGTCGATA CGGAGAAGAT GAGCTTGCTG CTGAATGGAA AAGAAGAGGC GCACTCGTGT TTGAAGACTT GCTGGATGTG GTGGAACTGC TTGGACGCAG TAACTGTCAA TTTGGCTAA
|
Protein sequence | MGTWPKIHPK RVRVITCDVT GTLVSFRGSI EEHYLGSAQK CGIDFVPDDP ASSTGHNGPL PIHKAFSQGY RECCQIYPCF GGHDISAKEW WKRCVLRSFE LAGARMNEAQ QEAVFQRIYS IFGSQACYEK FDDALPFLQW ANRSRIVCGV LSNADERYGD SILPMLGLTH DELQFQCFSK DFGLEKPDAR FFLAALKQAE LYLVSQNSYD VNDPLLPSQV LHIGNDFQKD FEGARRAGMH AALLSRYGED ELAAEWKRRG ALVFEDLLDV VELLGRSNCQ FG
|
| |