Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_15859 |
Symbol | |
ID | 7195744 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011690 |
Strand | - |
Start bp | 532843 |
End bp | 533826 |
Gene Length | 984 bp |
Protein Length | 200 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184270 |
Protein GI | 219128122 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.575833 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGCGAT ACTACGACAA ACAATGGGAC CAAATGTTCG AGCGCCTGCT CGCATTTCGC GACGAGAATG GCCATTGCAT GGTGCCCAAA CGATTCCCTC CAGACATGAA ACTCGGTACT TGGGTACACA CTCAACGGAT TCAATATCGC AAGCTTGTTT CGGGGGGAAA GAAGGAACCA GAAGTAGTGC TGTCAGATCA CGCAACGGAC GAAGAATTTT CATTCCGATT GACGGACGTT CGACGCAAGC GCCTCGAGGC CATTGGATTC ATCTGGTCGG CACGTGAAGG TGATAAGACT GCGGAACAGG GACGTATCAC ACGGAACTCT TACGACGATC AATGGGACGC TATGTTTAAT CGTCTCAAAG AGTATAAGGA TCGTTTCGGA GATTGTCTGG TATCGAAACG GTACAAAGAT GATCCCAAAC TGGGAACCTG GGTCGATACC CAACGGGTAC AGTACAAGAA AATGAAGAAA AAGTTGGCCG AGCCTGGTTC CGAGGAATCT GTTGATCTTG ACATTCCAGC TCCAGGCAAG CCAGTTATAG GAAGACTAAC AGACGATCGC ATACATCGTT TGGAGGAATT AGGATTTATC TGGTCTTTGC GTGACGATTG GCAGAAGCAC TACGAAGAAC TCAAAGAGTA CAAAAAGTCG AATGGACATT GTAACGTCCC AGCTCGATAC GTGCCGAATC GGCGTCTCGG AATTTGGGTA AGTGCACAAC GACAACAGTA CAAGATTGTC CAAACTCCGC CGGAGCTGCG CCCTCGCCGG TCAGCACCTC TGACAGACGA TCGTATTGAG TTGTTGAACG AGTTGGGGTT CACGTGGACG ATTCGTTCTC GTGACAGTCT CGGCGAATCG TGGACCCAAC GCTTGCAGGA CTTGCGAGAG TTCAGAGCCA TCCACGGCCA CTGCTTGGTT CCCTCCCGCT ACCCACCTAA TCCAGAATTG GGGATTTGGG TGGGAACACA GCGC
|
Protein sequence | MKRYYDKQWD QMFERLLAFR DENGHCMVPK RFPPDMKLGT WVHTQRIQYR KLPVIGRLTD DRIHRLEELG FIWSLRDDWQ KHYEELKEYK KSNGHCNVPA RYVPNRRLGI WVSAQRQQYK IVQTPPELRP RRSAPLTDDR IELLNELGFT WTIRSRDSLG ESWTQRLQDL REFRAIHGHC LVPSRYPPNP ELGIWVGTQR
|
| |