Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_56585 |
Symbol | |
ID | 7195556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011689 |
Strand | + |
Start bp | 417960 |
End bp | 418800 |
Gene Length | 841 bp |
Protein Length | 235 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183868 |
Protein GI | 219127284 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAATCT GTTCAATCCA AAAGTTCGTT TGGTTGTGCT GCATGTTTCT ACTCCCGTGC GCTACTATCT TTTCTTTCAT AATGTCGTCG GCACAGTTTT GGAATGATCG GTACGAGAAT GCGGAAGTGT TCGCCTACGG TACCGAACCC AATGATTTTT TGAAGGCATC GATTGACAGC AAAACAATCA ATCTTCCGCA AGGCGCTTCG TGTCTCTGCT TGGCCGAAGG TGAGGGGCGC AACGCCGTCT TTCTGGCTAA ACAAGGGTTT AATGTTGTCG CCGTAGACAA CGCCGAGGCT GGTGCTCGTA AGACGGAACA CTTGGCGCAG CGCAATCGGG TCAAAGTGCA GACCATTGTA GCGGATTTGG CCGATCTTGA GTACGGTAAA TCACGGTATG ATTTCATTGT TGGAATCTTT TGTCACGTCC CACCTCCGAT TCGCCAGCGT ATGTTGGATG AAATCCCAAA AGCGTTGAAA CCGAAGGGAT ACGCACTCTT TGAGTGCTAC ACGCCTGATC AACTCAAGTA CAATACAGGT GGCCCACCGT CCCCGGAACC CATGTTTTCT GCCAAATTGC TGGAAGAGAG CATGGGAATG CAGCTGGAAA TTCGAAGAAA CGAAGAGTTG GTGCGAGATG TTGTGGAAGG AGAATATCAC ACCGGGGAAG GGGCTGTCGT CCAGTTTATC GGACAAAAGA GACCGTAGAC TTCTCGAGAT AGCCAGCGAA TCATCAAGAC GGATTAGAAG GAACGATGGT CACCGCAATT GAGGTTACAA AATGTTAATT TTTTACCTGG AAGATCGTTG TTTATGGCGC TTTAGTGGGA CGACTATTCT T
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Protein sequence | MRICSIQKFV WLCCMFLLPC ATIFSFIMSS AQFWNDRYEN AEVFAYGTEP NDFLKASIDS KTINLPQGAS CLCLAEGEGR NAVFLAKQGF NVVAVDNAEA GARKTEHLAQ RNRVKVQTIV ADLADLEYGK SRYDFIVGIF CHVPPPIRQR MLDEIPKALK PKGYALFECY TPDQLKYNTG GPPSPEPMFS AKLLEESMGM QLEIRRNEEL VRDVVEGEYH TGEGAVVQFI GQKRP
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