Gene PHATRDRAFT_56585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_56585 
Symbol 
ID7195556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011689 
Strand
Start bp417960 
End bp418800 
Gene Length841 bp 
Protein Length235 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183868 
Protein GI219127284 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATCT GTTCAATCCA AAAGTTCGTT TGGTTGTGCT GCATGTTTCT ACTCCCGTGC 
GCTACTATCT TTTCTTTCAT AATGTCGTCG GCACAGTTTT GGAATGATCG GTACGAGAAT
GCGGAAGTGT TCGCCTACGG TACCGAACCC AATGATTTTT TGAAGGCATC GATTGACAGC
AAAACAATCA ATCTTCCGCA AGGCGCTTCG TGTCTCTGCT TGGCCGAAGG TGAGGGGCGC
AACGCCGTCT TTCTGGCTAA ACAAGGGTTT AATGTTGTCG CCGTAGACAA CGCCGAGGCT
GGTGCTCGTA AGACGGAACA CTTGGCGCAG CGCAATCGGG TCAAAGTGCA GACCATTGTA
GCGGATTTGG CCGATCTTGA GTACGGTAAA TCACGGTATG ATTTCATTGT TGGAATCTTT
TGTCACGTCC CACCTCCGAT TCGCCAGCGT ATGTTGGATG AAATCCCAAA AGCGTTGAAA
CCGAAGGGAT ACGCACTCTT TGAGTGCTAC ACGCCTGATC AACTCAAGTA CAATACAGGT
GGCCCACCGT CCCCGGAACC CATGTTTTCT GCCAAATTGC TGGAAGAGAG CATGGGAATG
CAGCTGGAAA TTCGAAGAAA CGAAGAGTTG GTGCGAGATG TTGTGGAAGG AGAATATCAC
ACCGGGGAAG GGGCTGTCGT CCAGTTTATC GGACAAAAGA GACCGTAGAC TTCTCGAGAT
AGCCAGCGAA TCATCAAGAC GGATTAGAAG GAACGATGGT CACCGCAATT GAGGTTACAA
AATGTTAATT TTTTACCTGG AAGATCGTTG TTTATGGCGC TTTAGTGGGA CGACTATTCT
T
 
Protein sequence
MRICSIQKFV WLCCMFLLPC ATIFSFIMSS AQFWNDRYEN AEVFAYGTEP NDFLKASIDS 
KTINLPQGAS CLCLAEGEGR NAVFLAKQGF NVVAVDNAEA GARKTEHLAQ RNRVKVQTIV
ADLADLEYGK SRYDFIVGIF CHVPPPIRQR MLDEIPKALK PKGYALFECY TPDQLKYNTG
GPPSPEPMFS AKLLEESMGM QLEIRRNEEL VRDVVEGEYH TGEGAVVQFI GQKRP