Gene PHATRDRAFT_55029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_55029 
Symbol 
ID7195488 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011689 
Strand
Start bp583014 
End bp584429 
Gene Length1416 bp 
Protein Length324 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183900 
Protein GI219127350 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATTGCTCTCA ATCTTTCTGG TAGACTTGAA ACAGAGCAAG CCTCCCTTGA CTTGCTCTCC 
GTGCGTTACA CAAAACGAAA CAATGTCACT GTCAGGTATC GTTTGCTCCC GCGCGAAATG
GTTTTTGCTA TCCATTGCTC TTCCTACATT AGGTTTGGGT CTGAACAAGA CTGCCTTTTC
CTACAATAAG AAAGACGAGT ATTCTCCCGA CAACTGGTAT AGGCTAGACA TTGCAGGAAA
CGTCTGCCGA GGGCCACGCA ATAGTCCTAT AGCTTTGGAG TCCACGCCCT GCGATGCGTA
CGAAGGCTAT GGACTCTATG TGAGTATACA AAAGCTGGAG TGAGGAGTAG GTCAAAGGTG
TCGATCACCG CGGATTCAGG TAGAACTGCC TCTGTTCCAC CTTGGTTGGT CAACGACTGT
GGATGTTTGG CACAGCTTGA CTCCATCTGT TTCTCACATT CTGAATTCTA CTGTATGCCT
TTTTTCTGTA CTTTCTCCTT TGTTTCTGAT AGTCTGGAAC GTGCACCCTC AATGACCTTG
ACTTCCAGTT GACCGAACTC GGTGTGAAGA TCAAATACCC CAAGGATGGA TCTTGCGACA
TCAACACGCT TACAGTTCCA GGTGTATCGG GTAACTTTCG TCTATTGGAG GTTACCATTC
ACGGAGGTTC CGAGCACAGC ATTGACGGCA ATTTCTCGGG AGCCGAAATT CAGCTCGTCC
ACGAGAAGAT AAATAGCCAA GAGGGACATC TGGCTGTCTT GGCCATTTTG GTAGAGCCTG
AAGGTCCCAA AGACAACTTA TTCTTTGGAA CGCTGTTGGA CGAATGGCGG GCAGTCCGCG
CCGACTCCAC CGCTTCTTGT GCAAAGGCCG GCTACGACGT ACCCACGTTG TATTGGTTGG
CTTCCGGGAC TCCAGTCAAC ACCCGTCACA GCTACGTCCG CTCGTACTTC ACCTCACCAC
GTTTCAACGC TTATTCACTA CTTCCTACCA ATACTTCATT CTACCGGTAC TATGGAGGCC
TCACGACACC TCCCTGTTCA GAGATTGTGT GGTGGAGTGT GGCGGACACA GTGATGCGCA
TTTCTACCGG CCAATACGCC GAGCTGATGA CAATGATCAC GACGGGATAC GTCAATGTGA
CGGACGAAGC AGGGTGTGAA CCGTGGAGTG TGGCGTCGCC CAGTGGCTCG ACCAGCCGGC
CGCTTCAAGC CCGAAATGGT CGTCCCGTTG ACCGCATTTG TCCCGTCTAA GGAAGTGTCT
TTGCGAACGC AAAAAGAGGA GTTTTTGGTG AGGGAATAAA GAGTGGTGAT GGAGTGGGGA
GAATGCAAAA TAAAAAAGAA AATGAGGGAA CGACATGTTT TTGCTTATTG TCTGGCTAAT
ACAATGAGTT ACAAAGGGAC TGTTTACGGC CAAGGT
 
Protein sequence
MSLSGIVCSR AKWFLLSIAL PTLGLGLNKT AFSYNKKDEY SPDNWYRLDI AGNVCRGPRN 
SPIALESTPC DAYEGYGLYS GTCTLNDLDF QLTELGVKIK YPKDGSCDIN TLTVPGVSGN
FRLLEVTIHG GSEHSIDGNF SGAEIQLVHE KINSQEGHLA VLAILVEPEG PKDNLFFGTL
LDEWRAVRAD STASCAKAGY DVPTLYWLAS GTPVNTRHSY VRSYFTSPRF NAYSLLPTNT
SFYRYYGGLT TPPCSEIVWW SVADTVMRIS TGQYAELMTM ITTGYVNVTD EAGCEPWSVA
SPSGSTSRPL QARNGRPVDR ICPV