Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_49297 |
Symbol | |
ID | 7195471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011689 |
Strand | - |
Start bp | 499535 |
End bp | 500900 |
Gene Length | 1366 bp |
Protein Length | 384 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184007 |
Protein GI | 219127573 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000536 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CGCGTCGACT GGCAAGTCTC GTCCTTTGGA CAGTCAGACT GCGGCAAAAG GTGTACGTGA ACAAACGGAC ACCAACCGAA TCCCCCTTAT AAATTACATT ATTTTTTCAT TGCCACCGAG CATTGCAATC ATGGCCCGAT TTCTTTCCCT TGTACGAAGC GCCCTCCTTC TCGCCGTCCT CCCCATGGCG TCGAGTGACA TGCACACGTT CGACTCGGAA CATGGTGTGC CTACTCACCG TGATATGCAA TCGTCCGCAT ACAGCATCAC GTTCGACTCC GTCACCAACA GCGGAAACAA CGTTACCGTG ACCTTTAACC ATGGTAACGG CGGCGCTGGT GAATTCGAGA TATACGTGAA AACTGGAAGC GCAACCACAT CACAATACAA CTTGACTTGT TACAGTGAAG GTGGCACGCT TTTTTCTGGC GATGGAATAT CCAGCCTAAC ACCCACGATT GGGACCGCTA GTTCGACGTT TGAATTTTCG TTTGACGACA ATGTGGATGA GACAGACCCG TTTTATTTTG GTGACGTGAA TACCCTAGTG GAAGGGACGG CGCAGCTCAT CCTCTGTGTC AAGTTTACAC TCACGGAAGT TGTTGACAGC AGCCCAATCG ACGTGAACTA TCGGGAAGTG GCCATTGCTA TCGATATTAC ACTGGACGGC GACCTTGCAA CGAACAGTAC CCAAGCCTTT GAAGTCAGTG CTGCAGAAGT CAGTGTGGAT CAGGACGGTA CAATTGAATA CACAGCCAAA GCCGAGCTCT GTTCAAGTTT TAGCGGTACA GTCACACCCG GAGTAGCCGT GCCTATTTGT ATCAAGACTT CGGACTATCC CTTGTCGCGC ATAATTAGTG TTCAAGACCT CTCCTTCAAG TCGGGAAGCA TCACGCAAGA TATTCGTTCC GAAGGCGCAG ACGCAACGGG CGCAGGCAAT TTCTACGGCC TCATTGCTAG TACTGCCGAT GGCCATTGTG TTATAAACGA GTGTATACAA TACGATGTAC TGGTGTACGC CATATTTGCA ACAGGAGATG ACCTGCAGGT TGATATCCTG GGAAACGTTG TTCTTGGCAT TGGGGATTCT CGACGCACGC TGCGAGCCCG ATTGGAACCG AGTCGCAACC TTCAGGAAAT AGTCCGCACC AGGGCTTTTC GATCGACGAT TTATCTTCCT GGACTTTCCT CTGGATCGGT TGCCCGTAGT TCGCTTTCTG GCAGCTGGAC TGCTCCAGTC TTGGCTTTGG GATCGTTGTT GCTCTCACTG ATCTTCCTTC AGTAAATTTG CAAAACAGAA TTCGATCACA ATAGCATCAA TCTCTATTGA AATTTTGAAA ACTGAAGTAT GAATTTGCAA AAAGCT
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Protein sequence | MARFLSLVRS ALLLAVLPMA SSDMHTFDSE HGVPTHRDMQ SSAYSITFDS VTNSGNNVTV TFNHGNGGAG EFEIYVKTGS ATTSQYNLTC YSEGGTLFSG DGISSLTPTI GTASSTFEFS FDDNVDETDP FYFGDVNTLV EGTAQLILCV KFTLTEVVDS SPIDVNYREV AIAIDITLDG DLATNSTQAF EVSAAEVSVD QDGTIEYTAK AELCSSFSGT VTPGVAVPIC IKTSDYPLSR IISVQDLSFK SGSITQDIRS EGADATGAGN FYGLIASTAD GHCVINECIQ YDVLVYAIFA TGDDLQVDIL GNVVLGIGDS RRTLRARLEP SRNLQEIVRT RAFRSTIYLP GLSSGSVARS SLSGSWTAPV LALGSLLLSL IFLQ
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