| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49291 |
|---|
| Symbol | |
|---|
| ID | 7195467 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011689 |
|---|
| Strand | - |
|---|
| Start bp | 484856 |
|---|
| End bp | 486573 |
|---|
| Gene Length | 1718 bp |
|---|
| Protein Length | 531 aa |
|---|
| Translation table | |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002184003 |
|---|
| Protein GI | 219127564 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.955571 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TGAGCGACAG CGACAGCTTA AACGAGAACA GCAGTTGTGG TAGTAGTGCA CGCGGACGAC
AGTATGCTCC ACTGAATCCA ATCCGAGACG AACGTGCAGT ACTTTTCAAA CTCGAAAGAA
TCATGAGACG GCCTCTGCGG CTCTGGTACA AGGAACCTCC GCCGCCTTCA CACGATCCTC
CATCCCCTCA ACTACATCAT CACCACCATT CACGATTTTA TCATCCACAC TGGGGATTTC
TCCTCATCTT ATCGGGAGTT GCCTTGCAAA TGTGGGTTTC CGTTACGCAA TTATCGGCCT
TGGAGGTACC CGAAAACAAC CTCGACGTGC CCTTGCTCCC AGCCTTTCGG AGCACCCGCG
AAGATTCGTC ACGAAAGACG CCGGCGTCCA CCAGTGCGTG GAGGCTCTAC GTCGGTCGTG
TACGGTACGG CGTGCCCGTG TCCGCCGCCT CCTACACGTG GGAAGCGCAA CCCCCGCGAG
TCGTTCGTTT GGCTCACGAC GGATCCTACC AACATCCGAT TCCCTCCTCC CGGAATCGCG
TGGCCCGACG GAATGTGGCG GAACTAGGGA ATGCTTCCTG TACCTACTGT CAATACGAGT
CGGATCAACA TCTATGGGAC TTTGAAAAAC CCTTTTACGA GGACTGTACC CCCATGGCGA
AATGGCAAAC CATCTTTTAT CCAACCTGCA ATGTCTTGCA CGAAATTACC ATGATGCACT
CGGAGGAAGA CTACGATCCA AAAGGACACG ACTTGGCCGA CGAGAGTATC GATGAAATTG
AGGATAACGA CGATGACACC GTCCCTTCCA TCGAAGAAAC CACCTTGCTG AGTATGCAGG
GCAGTTGGCG GAGTGTTTGG AAGTACCAGG ATGCGGTCAA CGATACGGCC GTACTCAAAG
TGCTGAAACA CAGTCGAGAA TTCGATCACG AATCTTTCGC CTACCACATT ACCGATGCCA
TAGTCATGGA GCGCTTGACC TCGTCCCCAC ACATTATCAA CGCTTACGGA TTCTGTGGAC
AATCTGTCTT AACTGAATTC GCTTCGGGCT CGGCGCGCAA GCTCATTAAG GACCCCAAAT
TTAACAGCAA GGAACGGCTG AAAATGGGAA GAGATTTGGC TCGGGCCTTG ACAGCAATGC
ATTCAATCGA CTTTCCCAAC AGCACCAACC CCACGCTGGC TCACAATGAC ATTAACATTG
CGAATGCCGT TGAAGTGGAT GGTCGCATCA AGCTTAACGA CTTTAATCTG GCCGTCTTGA
TGCGATGGAA TGATACACAA CCGTGTGGCT ATCCGGTACG GTTCGATCGA CCCATGTGGG
AATCACCGGA AGACGTCCGC AACCTCACCT ACGTAGATCC GGCACTCGGG GACGTCTACA
GTCTCGGCAA TCTACTCTTT AGCGTATTGA CAACCCGACA ACCGTGGCTA CATCTGGAAC
CGAACGGCCC CTACAACAAA ACAGAGGTTG CACAAATGAA AACGCAAGGC ATCATGCCAG
CTATTCCCGA TAAATATTTA GAATCGCGCA AGATGGCGCA TCACGCGTTG TATTTCGCCA
TCCAAGCCGC CTACCGAGAT GATCCGGCCG AGCGGCTCAG TTCCCACGAA CTGGCGGAAG
CTTTGGGGAT CGCTCTAAAT TGGGGTCGGG ATGGAAGACG CACCTCCCGC ACCGACCTTG
CCATGCTGTT TGTCAAGCCG AGACCCGACA TGTACTAA
|
|---|
| Protein sequence | MRRPLRLWYK EPPPPSHDPP SPQLHHHHHS RFYHPHWGFL LILSGVALQM WVSVTQLSAL
EVPENNLDVP LLPAFRSTRE DSSRKTPAST SAWRLYVGRV RYGVPVSAAS YTWEAQPPRV
VRLAHDGSYQ HPIPSSRNRV ARRNVAELGN ASCTYCQYES DQHLWDFEKP FYEDCTPMAK
WQTIFYPTCN VLHEITMMHS EEDYDPKGHD LADESIDEIE DNDDDTVPSI EETTLLSMQG
SWRSVWKYQD AVNDTAVLKV LKHSREFDHE SFAYHITDAI VMERLTSSPH IINAYGFCGQ
SVLTEFASGS ARKLIKDPKF NSKERLKMGR DLARALTAMH SIDFPNSTNP TLAHNDINIA
NAVEVDGRIK LNDFNLAVLM RWNDTQPCGY PVRFDRPMWE SPEDVRNLTY VDPALGDVYS
LGNLLFSVLT TRQPWLHLEP NGPYNKTEVA QMKTQGIMPA IPDKYLESRK MAHHALYFAI
QAAYRDDPAE RLSSHELAEA LGIALNWGRD GRRTSRTDLA MLFVKPRPDM Y
|
|---|
| |