Gene PHATRDRAFT_49268 details

Gene Information

• Locus tag: PHATRDRAFT_49268
• ID: 7195458
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011689
• Strand: -
• Start bp: 424678
• End bp: 426975
• Gene Length: 2298 bp
• Protein Length: 579 aa
• GC content: 54%
• Product: predicted protein
• Protein accession: XP_002183994
• Protein GI: 219127546

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTCGGAACGC AATTATCATA CCGAGCGTTG CACTGTGTGC TCACTCACTG CCACTGTACT 
CAGCACCATC CCCTCGTCTT GGTGTACTCC GGGATCACGA CTACTCGAAC ACATTACGTT 
GTGAAAATAC TCAAGAAAGG AAACAGACAT TTCTTACGTT GACAATACAG CATAGTCTCG 
TTTGCGTCCG CAACCCGATT CCGTTACGAG CTACGGGAGC GTGGCTTACC CGAGATACAC 
ACACTCACAA CACGATCCAT AGAGTCATCA ACTAATTTTC CACGAGATAT GAAGCGCTCC 
TTTGTGTTCC CGAGTGCCTG TTGCGGTCTC GTCGTGGCAT CACTATCGTT ATTCACCTCG 
ACTACCGGTA CCAGGGTGAG CGCCTTTACG CCTTCGCTAG TGTCGATCGG ATCGACTGCA 
GTACGGACTC TTCAACGACA GACTCTGCGA TCTCAGAATC AACCCCCATC CTCTCCTTTT 
GCCTGGGGGT GTGACGCTGC TGTCCGCACC TCGGTGTTAC ACGCACGCTC CCCCTTTTCC 
TCCTTGTCAT CGCCGGGGAA TGCCACTTCG GAAAGCTCGC ACGCTGTGCG CAGTCTCAGT 
CCGCAACAAC AACTACAAGC GAAAGATGAC CGTTCCATTA CCACCGACAG TGCCGTGTAC 
TGGTCCCAAG AAAATATGGA TGAGCAGCAT CACAAGGAGG AACTTTTGGA AAAGAACCGA 
AATCATATGA GTAATCTGGC GGTCACGAGC GATGCCAGTC TCGTGCAGCC CGGCCCCTCG 
CAACGGGACA TTAACATTGC TCGCATTTTG TTGATCGCCG CCGCGGCACT CTACGGCACG 
AACTTTTCTC TCGTCAAGCT ATTGGGCGAA ACGGACTTGC CCGTTGGTGT CAGTGGGGCC 
CTGCGCTTTG GCATGGCGGC GCTGGCAACC TCGCCTTGGC TCTTCGCCAA GGCCAAACCC 
AACGACGACG GAACCTTGCC GACCACCGGA TCAGACATGT CCGTGGAAAT GGCGGCAACC 
ATGGCTGGAC TCGAAGTCGG TTTTTGGAAT TCGATTGGTT ACATGGCACA GGCGGTCGGA 
CTCGCTACCA CCGCCGCCAG TAAATCTGCC TTTATTTGTA GTTTGGCCGT GGTCGTCGTA 
CCGCTCTTGG ACTTTTTGGC CGGGAAACTC CTTCTTCCTC GACAAACCGT GGGTGCCTTC 
ATGGCGCTCG CGGGGGTAGC AATTTTGGAA CTTGGGGGTA TGAGTGCCGC CGACTTTACC 
CTCACTTTTG GTGACGCCGC CAGTTTGTTG CAACCCATTT GTTTCGGGAT TGCCTTTTGG 
CGCATGGAAG CCGCCATGCA GCGGTTCCCC AACGAAGCGA ATCGATCCAC CGCCGCACAG 
CTGCTCATGG TGTTCTTGGT CTCGCTGACC TTTGGACTTT TTACCGACCC GGGCGCCTTC 
AACGTGGCAC AATTGCAGGC CTGGTTGTCC GACACCAATA TCTTGGCGAG CTTGTTCTGG 
ACGGGCTGTA TTTCGACCGC ACTCACCGTA TACATGGAAA CACTCGCGCT CAAGACCCTC 
AGTGCGGCCG AAACGACGCT CATTTTCTCT ACCGAACCGC TCTGGGGCAC CGCTTTTGCC 
GCTCTCATTA TGGGCGAAAC GCTCGGATGG GAATCCGCCG TGGGTGCCGT ACTGATCCTC 
TCCGGATGCG TCTTTAGCAA TCTCGGTATA CAAGGACTCC GAAATCTATT GCCGGGCTCA 
GACAAACCGG ATGATTCGAA AACGACCGAC ATTTCTGGCA CTACACTGAG CTCGTCGCAC 
GTGGCGGACG ATTCCGCCGG CAGCTCTACA CACCACCAAG CGGCGTCCTT TTCCCCCACA 
TCGACCGAGC CGACGAAAAA GTTTTGGAAT CCCTGGACGA AAGAATGGAC GCAAGTGGGA 
GCGGTCGCCA CCTTTGGAGC CGCTCTGTTT GGCGTCTGGA ACGAACTGTC CGTAGGAACC 
CGGGTCATTG CCATGCAGGT GGAAGAAATG ATGGACAATT TTCTGTAACG GCGTTGCTCC 
TTCCCTCGTG GTGGGTGACT GAGCGGTTGA CCGGTATATT GTCGCATTGG TCAGAACCGC 
TTTCCGATAC ACAAGAAACA CACAATGGTA CCGATTTCCA CAGAGCAAAG CCGGCTTTTT 
TACCATTTTT CATTCCCGTA CTTTGGAGGA CCATTTCGAA GCCTCCATTT TGCAAATCAA 
TATCATCATT ACGAACTTTC CTATAGAGAC TACAGCAACG CCAATAACAT CATATAATGA 
TCATTTCTTC ACTCGCTA 

 

Protein sequence

MKRSFVFPSA CCGLVVASLS LFTSTTGTRV SAFTPSLVSI GSTAVRTLQR QTLRSQNQPP 
SSPFAWGCDA AVRTSVLHAR SPFSSLSSPG NATSESSHAV RSLSPQQQLQ AKDDRSITTD 
SAVYWSQENM DEQHHKEELL EKNRNHMSNL AVTSDASLVQ PGPSQRDINI ARILLIAAAA 
LYGTNFSLVK LLGETDLPVG VSGALRFGMA ALATSPWLFA KAKPNDDGTL PTTGSDMSVE 
MAATMAGLEV GFWNSIGYMA QAVGLATTAA SKSAFICSLA VVVVPLLDFL AGKLLLPRQT 
VGAFMALAGV AILELGGMSA ADFTLTFGDA ASLLQPICFG IAFWRMEAAM QRFPNEANRS 
TAAQLLMVFL VSLTFGLFTD PGAFNVAQLQ AWLSDTNILA SLFWTGCIST ALTVYMETLA 
LKTLSAAETT LIFSTEPLWG TAFAALIMGE TLGWESAVGA VLILSGCVFS NLGIQGLRNL 
LPGSDKPDDS KTTDISGTTL SSSHVADDSA GSSTHHQAAS FSPTSTEPTK KFWNPWTKEW 
TQVGAVATFG AALFGVWNEL SVGTRVIAMQ VEEMMDNFL