Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_49264 |
Symbol | |
ID | 7195554 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011689 |
Strand | - |
Start bp | 406644 |
End bp | 414720 |
Gene Length | 8077 bp |
Protein Length | 2338 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183989 |
Protein GI | 219127535 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.372613 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTCCTAATAT GCCAATAATG TTGAGATGGA TAAACTTAAG AGCTTCACTG TTAATTGTTT CCTTCCAAAT CAAATCGTTT TCTTATCATC GAAAAGTTTG CCAAAAATTC ATTTCTATGC GGTCATAGGG CGTCATAGGA CAAGTCAGAA TGACCCTGGC AAATCGGCAA AAACCCTCCT CATTTGCCAT CGGTCGCGAT GACACAAATC CAACATCCGA AATAAAAAAG ACAACCCCCC TTCGTTGAAT ACAAGGTGAG TAGAAAGGGA TGCCACTTTC GTCAGGAATG TCAAGAAAGA GGCTCTGTTC CCTATGAGCA GACTTCTACG CTCTGCATCG TTACTTCCTC GACAGCATGG CACATTGCGA CTTTATGTTG AAGTGAATGT TGAGTTCTGA TAAAACAATG TCTTCCTTTC TTCGTGTTTT GCCATTCCTA CAGTATTATT GTTCCCTTGC AGAATGTCAG GACCCCCCTC CGGTCGTCTT TTGACAGATC CATCGGATGT TGATGCTCTC ATATCCTCAT GGTCTACCAA CCAGCATGAT GAGGAGAATC CCCCACCAAC ATCTCCATCA AGGCCGTCCC AGGGCTGCTT CACCGCCACA GTAGCGGCCC CGCGATCACG CCCATCGATG ATACCGGTTC TGGAAAGCGG CAAACAAGAA GGAGTCCCAT CCCCAGTAAT CACCAGCATT GTTACCCAAC ATGATCAAGT GAACATGGCG CCTATGCTAA CCACGTCGCC TCACATTTTG GCAGGAGCGG CGGGGTCTTT GAATCGCGAG CAACCACTCA CTGGTGCGCC TACTAGAAGC ATGGACAAGT CGGACTCCAT GGACGAAAGC ATTCAAAGTC AAAACGTACC TACAGCATTT GTATCTCGCG TTTCTCAGTC TCTCGTATCC TTGCCTCCTT CCGCGAACAC AAATCTCAGA CGTGTGTCGC AAACGCACGG TCGCCGGGGA TCCGTTGGAG GCCAATCGAA AGTATCGAAA GCTGAAGGTA CCAGAATGCC GGTTTGGTTG GCTCGACCTC CCTCAGTCGC AACTATAAGT CGCCGTGACA TAATTGATTC TGAAAATAAA AGATTTGAAA ACGAGAGGGG TTGGAATTCG CGGCCGTTGC TTTCCCTGGA AGTCGGTAGT CAACGCGAAG TCGTTTCGAC ACCCTACCGT CGAGACTGCA ACGGACAAAT TATACCCTTG GCCATCCAGT CACCTCTCAT CCGACGTAAT GAGTCATTTT TTCGGGATCG GAGAAGTGTT TTGCAAGCTG CAATTTCAGA GCGTACTTCG TATGACATTC AGCTAAACAA CGAAGTCGGT GTTTTGGGAG GCGCCTGGCG AGGCCTCGTG CGCCGTCTTG TATTGCTCGC ACTAAACGAC GTCAACGCCT TGCAGCTGAG TCGGGCTTTG CAGTTTCAAC TACCCTTCCA GACGGGCTTT GAGGCCTACT TGACCTCGCA AGTCATTGAA GCACTGGACA GAGGTGACCC TGCCGAAGTT GCCGATGTCC TTAGCATCGC TTTTCTCAAT CGGAACGTCT CGCGCGTTAT TATACAGAAC TTGGGACCCC GGTACGACTT TTTGTGGCAC TGGAGCACCG CCATTACTTG GAATCGCGTG TTTGACGCTT GGGGACAGTT CCCAATCGTT GGGATTACGG GTTTTCCCGC CACGGAAAAC TTCCCTTCAA CGCGAAATCA CGCCCTGGCA TCCATCTTTC GCAATCTATT GGGACAAGGC AACTGGGTCA CTCGCGTTGT CACGCAAGGT CGGGAAGGAC TATTGACGGA CAATCCCAAC AACACGGCAC AGAATCTCGC ACCCGAGTCC AACGGCTTTG AACTCGCAAA CCGCAACCAG TACGGAACAT ACTTTGGACG TGCTAAGACC AACGAGTTCC GTTTCGCCCA TCGACTGCCA ACCGACGAAT CGATTGTTCG GACGTTTGTC GCCAGTCCAA TGCCCACAAT GACCAACAAT GGGGTCGTCC ACGTACTCCG ACAGCTGGCC AAGCACTGGC ACAACATGCT GTCTCAAGAG TGGGGCAACT TTGCCCACCA GCGTATGGAG CAGTTAGATC CCTTTGAAAC ACTACGATTT CACATGCCCC GGGTCCTCCT GTTGCTGTCG AGTTTACGGG GTCGCAACGC GTGGGATGCG CAAGTGTTGG GCCCGATTGT GCGCAGATTG CAGGCTTTAA AGCCTGATGT GAATACTTCG GCGGCGTGGA ATCTTTGCAA GGAGATGCAG AAAGACGTCG TGGAGACAGT GGCGGGCGGC GTTTCTTCCA TCAGTGATTC CCTTTGGTCC TGGCTGGAAG CTATTAGAAA ATCGCTTGGG CTTCTGGAAC TTCAAGCTGG AGAAGTGCTC AACATTGTCA CTCCCGTCGA ATTGGGCATT CGCCTTGGCC ACGATATTGT CACCCAAGTC AGTTGGAAAG TTCCATCAGA CAACATTCTC ATTAGAGCGA TATTGAGTCA CATCCAGGGG CAAGACACGG GCGCCGTGGA TAAATGGCGT ATACAGAGTG CCCTCCAGAA GACGACCCCT CGCGACATGC GCACGTTGAT AGAGCTTGTG AAGGGCGATC TAGGCCACCT GAAGCCAGCT CAGCTGCTGC TCGGTCGGGT CAAGACTTTA CTTCAAAGGG AGCTTAGGCG GGAATACCTA AATCAGGCAA TTCGAGACCT CTCTGTTGGA CCGTCGATTC AAGGCGAGCT TGTGCGGGAT GAATGGTACT GGCTGAATGA GAATGATTGC CTCGCCCTTC ATATCTATAT TGGCAACGTT CCAGATCGCG AGCTCCATCA ATTTATCCAT GTCGAGTCAG GCAACGATAA GATAATTTCT TTAAACAAAG CTCATCTCAT GCCTCGAGCC TACATTCCGG TGGCGGAATC CATTTCGCGG GCACAAAAAG TAAGCGAGAA GAGCGGGCGG CTGGTTTTGC ATAAATCCTC TTCTCACTTT GTTGTGCTTT AGGCATTTAT GACCATTGAG CTCGAATACG GCAAGACGTT CCAGTACAGT GCCTTTATGG AATTTTCCTT TCTTCGGATT GCCCTTCAAC GGCTCGGTAC GAACAAAAGT ACTTCATCAA TTTGGTTTGA GTCTCAGTTT CTCACTCGAA TTTTCTTACT CCCTACACAG TGGTAGTATC CCAGATGAAT TGTGAAGAAC TCGACAATGC TCGTTTGAAT GTTCTCCGGG AGATTCAACG TTCGAATCAA CCCTTCCTCG GTCCAGAAGA CCTCACACCT GGGAACACTT ACTATAAATA CAACCAATCC ACAGCTCGGT ACACGCCGTT TCTTTGCGAG GAGAAGACTT CAGAGACGAT CCAATTTGAC AGAACCAAGG TTGTGCGGGC TCCGCCGCAA TCTGTCCTTG TCGTGGGAGG AGGCCCAACT GGACTTATCA CGACAATTCA CTGTACGGAA GCGTGTTTAG CTAGCGGGGG CACCATGAAA CTCCAGGAGG CTCGCGATGC TTTTGCGAAA GGAGGGTCAA CCTTTGAAAG AGCACAGATT GTTCGACTCG ATGCTCGCTG GATAGCCATG CTAAGGTACC ATCTTGGAAC CATTTTTGAG GACGTCTACA TTCCTGCTTC CGGGGAAACC GATGCTCAGT TAGGAAATAC ACTGTAAGTG AGCATTCTGC TGTCTCCGTT GCTGTTGATT CTTGGATGCA GCTCTCACCA CAATACCGGC TCTTGATACA GTCCGACGCA AGGTTTCGTT GAGATCACAA TCAAAGATTT GGAAAGTTCG TTGCACACTG AAGCATCTCG TCTTTGGTCT CGAGGAATAA TTTACGTCCA AACTGATTCC AAGTCCAAGT ACGACTCCGT TTCCAACAGT ATGGTGAAGC AGGGCCACCA TCTCAAGGAT GGTGATGTTG TTTTACGGTC CGTAGATCCG GACGGTAAAG ACTCTTCCGG TCTTTACTCA TGGAAAGTTG CAAAACTCCT CTACACACCG CCGCTGGGGA TCGACGATTT AAAACTCGGT GAGGAGTACG CGGTGTGGGT ACACCAGGAC CAGAAAGTGC GACCTTTTAA ACTCGTAGGA ATGGATCTCG ACGCAAAGGT ATGCCACAGA GTAGTAGGGA ATGTCTCAAG CCCATATTCG AAATCTAACT TTTTACGGTC TTCCGTTCGT AGTCTTACAA GTTCCGCCCC CATGCGAAGG AAATGAGCAG CCTGAATGTC AATGCGACGA ATCTGCCATC TATTTACCCA ATAGGAACGG ATACGAAAGC ACATGTAGGC GTCCAAGATA TTCGGTTTCA GTGCCAGGAA AAACGACGAA CGGGAGAATT TTTCCAGCAG ACTGTACCCA TGGCGTCTAT TGAGGATACC ATGTTCACTC TGGATCTCGG ACATACTCAC GTCGTCGAAG CCATCGGGTA AGCATTGCCC TCTCGAGTAA GCTCTTCACT CGGCAAGCGA GTCTTCGGGT TGTACACTCA CTTCTCTCAT CTCTTCCGGT CTCTTAGAAA ACAATACCCA TCAGCCACAC ACATTGGTGT CACCACAAAA GAGCCTTACG GCGTGTGCTG TATGCAAGGA TTGAAAGTGT CCATGGGGAT GCACAATTTC GGAGAGAAGC GATGGGGAAC CGGTATACTA GACGATGTAC GATCGCAAAA TGATCAAAAC ACTAGAGTCG TAGGCGACTT CACAAAGATG GTCCGAGTTG TGCCTATCGT CCAGCGCATG TATGAGACCA TCTCCAACGA CGACGATTGG CGAATCCATT TCGACAATCT CGTGAAGGAA AGTGGTTTCC CAGAACTGGA AGAGGTTCAG TCTATATTCC CCCAGCTGGT GACGGGCTGC AAATGGCTCA GCCAAACGTC AGGAAGTTTT CGCCGTAAAA CTTTGCAAAC GCGCTTTTTC GAAACTGGAG ACAACTATTA CCTCGGGATG GAATTTCCAA GGGAATATGA AAGTTGGAAG AAGGAACTTT CCGATCGCTT GGTCGAGCCT CTGGCGTCAA ATCCAGAGTA CGTATCCAAA TCCAGGGCGA TCGATCGTCT CCGTTCTACT TTCGTGCATC ACATTGATCG ATTATGGTAC GAGGGGTGCC TCGAGACCAT TCGAACTGGT GACGTGTATA ATCCAGGAGC ACGTAAGCGC GTTCCCCGCC TCTATCTCAT CAATTCTTAC ACAGCACGCT CCTTGAGTTC CTTGCCAATC GGAGAGAGCT TCCGTCTGGT GGCGGAGCCA CAGGCAAAGT ACGAAGTCCT GACGAAATCA GTAACGCAGG TTATTGTGCG GAGTGTGGAA GGGTATATTT CAAAGTTCCA AAACAATACC AAGGTCTTGC GTGAGGGAAA CTTGACCCGG GGTCCAGACG GGAACCAAGA GTCGAAAGTG GTAAGTGAAA TGCTATCGTC CCTTTCCTGA TGGAGAAGGT GTGTCCAATC TGCGGGGATC TCACACAGCT TGTGTCCTAG TCCTTGGCAA CCTTCGATGT GGGTCACTAC GTCAACCATC GAACCATGCG GCTGTCAAAC GAGGAGAAGG GCTTCATTTT CGCTTTCGTC GGAGACGAGC AAGCCACACC GCATTTTATG CGATACAGTG GGCTGACAGG TGCATGCATC AATGCGATGT CTTTTAACAA CTTTATCGCA GACGCTAGCC GCGGCATCTC GTTTGATGCG AGGCTGCAGC AGTACTCCAA GGAAACGGAT TGGTCGAACG GAGAAGTCGT TCAACGAGGA ACCGGGGCAA ACTACGGGCA GGACGGTTTC TTGCGCCCGG GCTTTTCCTA CCGGGACGGA GTGGACTACC TATACGCCAA AATAGTCGAG TTCGAGGAAA CCGGACAAGA TTTGGACAAT TTGCTGTCTC GCGACTGGAT GGTTAAGCTC ACGGCTTCCG TTATACCTCG TGGGCTGGAA AATAATCAGA TATTTCTCGG AAGCTTGCAG CAGCACTGGA ATGCGGCTGT GTCTGACAAG TTGGAGGCTA AAATAGAGTC CGATATCCCA GCCGATGGAA CTGGAGCAAG AACCGTCGAT GCCGTTCGGA CTAGTCGCAG TGTCCTGACC GAGAAGGATG TCGTGTTGAC TGAATACTGT GAACTGTTGC TAGGGCATCT GCAAGTCGAT GAGGCGACTA AGAAAGTCCT GGCTACACAG CATTTCCCCC GTGCTCGTCG ACTTTGTGCT ATTCTCAGTC AGTTAACTGA ATTCGCCGCC AACGCCTATT TGAACAACGA GCGTGTGAGC TCCGAGCTCT TTAACCAACC GAAGCCGGTC GACTCCCTGA TCGACGACTT CTCTGTGGAA GCCCAGAACT TCGCGAACTC CTTGACCCAG TCAGCAGCTC TTGCATCCGG CGTTCTTGCG TTCCGACTCA TCGGCAGCAG CCTTGGTAAC CTCTTTTCTG CCTTATTTGC TGGATTGAAC ATTGTGATCT CGTTCGGAAC CATGGCGAAT GTCTCTCGAT ACAAGATCCG GAACGAGGAA TCCCGAGTCT TGTTTGCCGA CAAGAACTTT TCCCGGGTGC AGTGCTGTGT TTTCGCCTTG ATGAGCCAAG ACGACCAAGA TTCGACGCCG TTGGCGAAAA ATCCCTTTTT GAATCTTTTG GAGCAACGTG CGAAAGCGTT CCGTGAGAGC TTGACCTACT ACGGGTACAG TAAACCAACT GAATTTGACA TTGCATACGA GCAGCTCAAG TCACGCGCCA GCGACATCAG TGAAATCCAA AAGTTTCAGG TTTTGTTGGT ATCAAAGCTG ATCGTGGACA CTTACCATGT CAATAGCTAC GTACAGGAAA AACTTGTCGA TGTTCTCCGA GTGCTGGACG AAATGAACTT CCTGCTCGAA AGCAGGAGCT CCAAGTCAGG AAACGATGCC AAGCAGCTAT TCGACCGCTT GCTTGCGTAC GATCACATGT TGGAAGACTC GTTGCAGAGA GGCCCAGTGC GCTTTGGTTT TATCAAGCAG CGAAAGTTTT GGCATTGGAA CATTATCGTA GCTTTCCGGT ACTTGTACAG TCTCCTCTGT TGCTCCTCCA GACACTATTC TACCACGTTC ACTCCAATTC AAACTGAAAC CAGAGGTATC GTGAAAAGTC TTCACTTTCT ATCGAAGGAA CACGATTCGA AGGTTTTGCG ACGTGAGAGT CGAGACTTTG AGACCTTCTT CTGGGCCACT CGCGAAAGTG ACATCGCCTC TCTGATTTTC CTGTCGGGTT TCTTCGTCTT CGTCGCCTCG GTCCTTTTCA GCGTAGCGCG AATTTTCGAC ATTGACTCTC TGGAAGATGT CGCTTTCTGG GCCAATGCTG TGTCCACAAT TGGTGCTGTT TTGGCGGCTG TTCATCTTCT CCGCAAGCTT GTCATCCTAA TTGGACTTTG GACAATCCTG TGTTCGAAGA CGAGTCGTAC GGATGGAAAG GATCGCGTCA ATATTAGCCG GATCCGTAAC GTGACGATGA CTCAGATTCT TCTGACCTTG ACCCGTCTAG TAACTACCCT GGCTGCTTCC GTGGCCTTGC CTTGGTCAGT GATCGAGAAC GCCTTCCCTG ATGCTAGTTC CTTGAGCTCA GATATTCCCG TTTGGATTGC GTTGGGTGCG GTGTCCATGG CGATTCTGGC AACAGTATTT TTCTTCCTTG TGGAATATGT GGTCCGCTAC AATCTCAGCC CGCAGCTTGG ACCCTTTGTC AGCGAGCTTT TCCGCGACGA AATCGAAAGC ATACACCAGG ACTTGTCGGT GCGTCAAAAT GAGATAGACA CGAAGATAGT CCAGGACCGT GAAAACTGGG AGTATGTTGC GAGAGAGTTT CTGCACAAGT ACCGCTTCGA CACCGTGTTT GCGGCGGATC GGTTCGGTAC CATACTCCAG TACATACAAT CTGGAATGAA GCAGCCTGCT GACTCCAAGT GAGATGTCTT GTCCCATATC AAAAATGAAA TGATATGTAG TGCTTTAGGA ATGATGAATG TGAGTTTTCG TAGAATCATC GTACATAGGA ACCTCCAGAC CTAACCGAAC TAGAATTGCA TCCCGTCATC TGGAGAAGAA ACAAATTCTG GAAGCGGGCA TGCTGGG
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Protein sequence | MAHCDFMLKM SGPPSGRLLT DPSDVDALIS SWSTNQHDEE NPPPTSPSRP SQGCFTATVA APRSRPSMIP VLESGKQEGV PSPVITSIVT QHDQVNMAPM LTTSPHILAG AAGSLNREQP LTGAPTRSMD KSDSMDESIQ SQNVPTAFVS RVSQSLVSLP PSANTNLRRV SQTHGRRGSV GGQSKVSKAE GTRMPVWLAR PPSVATISRR DIIDSENKRF ENERGWNSRP LLSLEVGSQR EVVSTPYRRD CNGQIIPLAI QSPLIRRNES FFRDRRSVLQ AAISERTSYD IQLNNEVGVL GGAWRGLVRR LVLLALNDVN ALQLSRALQF QLPFQTGFEA YLTSQVIEAL DRGDPAEVAD VLSIAFLNRN VSRVIIQNLG PRYDFLWHWS TAITWNRVFD AWGQFPIVGI TGFPATENFP STRNHALASI FRNLLGQGNW VTRVVTQGRE GLLTDNPNNT AQNLAPESNG FELANRNQYG TYFGRAKTNE FRFAHRLPTD ESIVRTFVAS PMPTMTNNGV VHVLRQLAKH WHNMLSQEWG NFAHQRMEQL DPFETLRFHM PRVLLLLSSL RGRNAWDAQV LGPIVRRLQA LKPDVNTSAA WNLCKEMQKD VVETVAGGVS SISDSLWSWL EAIRKSLGLL ELQAGEVLNI VTPVELGIRL GHDIVTQVSW KVPSDNILIR AILSHIQGQD TGAVDKWRIQ SALQKTTPRD MRTLIELVKG DLGHLKPAQL LLGRVKTLLQ RELRREYLNQ AIRDLSVGPS IQGELVRDEW YWLNENDCLA LHIYIGNVPD RELHQFIHVE SGNDKIISLN KAHLMPRAYI PVAESISRAQ KAFMTIELEY GKTFQYSAFM EFSFLRIALQ RLVVVSQMNC EELDNARLNV LREIQRSNQP FLGPEDLTPG NTYYKYNQST ARYTPFLCEE KTSETIQFDR TKVVRAPPQS VLVVGGGPTG LITTIHCTEA CLASGGTMKL QEARDAFAKG GSTFERAQIV RLDARWIAML RYHLGTIFED VYIPASGETD AQLGNTLPTQ GFVEITIKDL ESSLHTEASR LWSRGIIYVQ TDSKSKYDSV SNSMVKQGHH LKDGDVVLRS VDPDGKDSSG LYSWKVAKLL YTPPLGIDDL KLGEEYAVWV HQDQKVRPFK LVGMDLDAKS YKFRPHAKEM SSLNVNATNL PSIYPIGTDT KAHVGVQDIR FQCQEKRRTG EFFQQTVPMA SIEDTMFTLD LGHTHVVEAI GKQYPSATHI GVTTKEPYGV CCMQGLKVSM GMHNFGEKRW GTGILDDVRS QNDQNTRVVG DFTKMVRVVP IVQRMYETIS NDDDWRIHFD NLVKESGFPE LEEVQSIFPQ LVTGCKWLSQ TSGSFRRKTL QTRFFETGDN YYLGMEFPRE YESWKKELSD RLVEPLASNP EYVSKSRAID RLRSTFVHHI DRLWYEGCLE TIRTGDVYNP GARKRVPRLY LINSYTARSL SSLPIGESFR LVAEPQAKYE VLTKSVTQVI VRSVEGYISK FQNNTKVLRE GNLTRGPDGN QESKVSLATF DVGHYVNHRT MRLSNEEKGF IFAFVGDEQA TPHFMRYSGL TGACINAMSF NNFIADASRG ISFDARLQQY SKETDWSNGE VVQRGTGANY GQDGFLRPGF SYRDGVDYLY AKIVEFEETG QDLDNLLSRD WMVKLTASVI PRGLENNQIF LGSLQQHWNA AVSDKLEAKI ESDIPADGTG ARTVDAVRTS RSVLTEKDVV LTEYCELLLG HLQVDEATKK VLATQHFPRA RRLCAILSQL TEFAANAYLN NERVSSELFN QPKPVDSLID DFSVEAQNFA NSLTQSAALA SGVLAFRLIG SSLGNLFSAL FAGLNIVISF GTMANVSRYK IRNEESRVLF ADKNFSRVQC CVFALMSQDD QDSTPLAKNP FLNLLEQRAK AFRESLTYYG YSKPTEFDIA YEQLKSRASD ISEIQKFQVL LVSKLIVDTY HVNSYVQEKL VDVLRVLDEM NFLLESRSSK SGNDAKQLFD RLLAYDHMLE DSLQRGPVRF GFIKQRKFWH WNIIVAFRYL YSLLCCSSRH YSTTFTPIQT ETRGIVKSLH FLSKEHDSKV LRRESRDFET FFWATRESDI ASLIFLSGFF VFVASVLFSV ARIFDIDSLE DVAFWANAVS TIGAVLAAVH LLRKLVILIG LWTILCSKTS RTDGKDRVNI SRIRNVTMTQ ILLTLTRLVT TLAASVALPW SVIENAFPDA SSLSSDIPVW IALGAVSMAI LATVFFFLVE YVVRYNLSPQ LGPFVSELFR DEIESIHQDL SVRQNEIDTK IVQDRENWEY VAREFLHKYR FDTVFAADRF GTILQYIQSG MKQPADSK
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